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  5. Mp7g10140.1

Mp7g10140.1 (PAPS1)


Aliases : PAPS1

Description : poly(A) RNA polymerase


Gene families : OG0000731 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000731_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp7g10140.1

Target Alias Description ECC score Gene Family Method Actions
AT4G32850 PAP(IV), nPAP nuclear poly(a) polymerase 0.02 OrthoFinder output from all 47 species
Adi_g055927 PAPS1 poly(A) RNA polymerase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g085047 PAP(IV), nPAP poly(A) RNA polymerase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g102293 PAPS2 poly(A) RNA polymerase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18756 PAPS1 poly(A) RNA polymerase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06963 PAP(IV), nPAP poly(A) RNA polymerase & original description: none 0.06 OrthoFinder output from all 47 species
Als_g33647 PAP(IV), nPAP poly(A) RNA polymerase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g62706 PAP(IV), nPAP poly(A) RNA polymerase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008352001 PAPS1 RNA processing.RNA 3-end polyadenylation.poly(A) RNA polymerase 0.03 OrthoFinder output from all 47 species
Gb_12958 PAPS1 poly(A) RNA polymerase 0.04 OrthoFinder output from all 47 species
Gb_21100 PAPS1 poly(A) RNA polymerase 0.02 OrthoFinder output from all 47 species
Lfl_g10052 PAP(IV), nPAP poly(A) RNA polymerase & original description: none 0.05 OrthoFinder output from all 47 species
MA_136671g0010 PAP(IV), nPAP poly(A) RNA polymerase 0.03 OrthoFinder output from all 47 species
MA_27451g0010 PAPS1 poly(A) RNA polymerase 0.02 OrthoFinder output from all 47 species
Ore_g44222 PAP(IV), nPAP poly(A) RNA polymerase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g46410 PAPS3 poly(A) RNA polymerase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08262 PAP(IV), nPAP poly(A) RNA polymerase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27060 No alias poly(A) RNA polymerase & original description: none 0.02 OrthoFinder output from all 47 species
Smo169728 PAPS1 RNA processing.RNA 3-end polyadenylation.poly(A) RNA polymerase 0.02 OrthoFinder output from all 47 species
Solyc08g066200.3.1 PAP(IV), nPAP,... poly(A) RNA polymerase 0.05 OrthoFinder output from all 47 species
Zm00001e024922_P001 PAP(IV), nPAP,... poly(A) RNA polymerase 0.03 OrthoFinder output from all 47 species
Zm00001e030659_P006 PAP(IV), nPAP,... poly(A) RNA polymerase 0.03 OrthoFinder output from all 47 species
Zm00001e037202_P005 PAP(IV), nPAP,... poly(A) RNA polymerase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0004652 polynucleotide adenylyltransferase activity IEA Interproscan
MF GO:0016779 nucleotidyltransferase activity IEA Interproscan
BP GO:0043631 RNA polyadenylation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002934 Polymerase_NTP_transf_dom 92 178
IPR007012 PolA_pol_cen_dom 26 369
IPR007010 PolA_pol_RNA-bd_dom 372 432
No external refs found!