Aliases : LHCB2.3, LHCB2, LHCB2.4
Description : component LHCb1/2/3 of LHC-II complex
Gene families : OG0000137 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000137_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G29910 | CAB3, AB180, LHCB1.2 | chlorophyll A/B binding protein 3 | 0.03 | OrthoFinder output from all 47 species | |
AT1G29920 | CAB2, AB165, LHCB1.1 | chlorophyll A/B-binding protein 2 | 0.02 | OrthoFinder output from all 47 species | |
AT5G54270 | LHCB3*1, LHCB3 | light-harvesting chlorophyll B-binding protein 3 | 0.02 | OrthoFinder output from all 47 species | |
Adi_g022370 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Aev_g02102 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Ala_g06137 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ala_g13791 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aob_g02738 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
Aob_g04833 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
Aob_g07011 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
Aob_g07015 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
Aob_g13734 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
Aob_g17843 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
Aob_g18768 | LHCB3*1, LHCB3 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
Aob_g26878 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aob_g28157 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Aop_g12114 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Aop_g16137 | LHCB1.5, LHB1B2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.01 | OrthoFinder output from all 47 species | |
Aop_g16485 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.01 | OrthoFinder output from all 47 species | |
Aop_g21318 | LHCB3*1, LHCB3 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.01 | OrthoFinder output from all 47 species | |
Aop_g28499 | CAB3, AB180, LHCB1.2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.01 | OrthoFinder output from all 47 species | |
Aspi01Gene37766.t1 | CAB3, AB180,... | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene71079.t1 | LHCB2.3, LHCB2,... | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0042.g026913 | LHCB3*1, LHCB3 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
Cba_g04468 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Ceric.05G101100.1 | LHCB2.3, LHCB2,... | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.10G082500.1 | LHCB1.4, LHB1B1,... | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.10G083000.1 | CAB3, AB180,... | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.12G001900.1 | LHCB3*1, LHCB3,... | component *(LHCb1/2/3) of LHC-II complex & original... | 0.01 | OrthoFinder output from all 47 species | |
Ceric.15G047900.1 | LHCB1.4, LHB1B1,... | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.37G024700.1 | LHCB2.3, LHCB2,... | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
Cre01.g066917 | LHCB2.2, LHCB2 | Photosynthesis.photophosphorylation.photosystem... | 0.02 | OrthoFinder output from all 47 species | |
Cre03.g156900 | LHCB2.2, LHCB2 | Photosynthesis.photophosphorylation.photosystem... | 0.02 | OrthoFinder output from all 47 species | |
Cre04.g232104 | LHCB2.2, LHCB2 | Photosynthesis.photophosphorylation.photosystem... | 0.02 | OrthoFinder output from all 47 species | |
Cre06.g283950 | LHCB2.2, LHCB2 | Photosynthesis.photophosphorylation.photosystem... | 0.02 | OrthoFinder output from all 47 species | |
Cre06.g285250 | LHCB2.2, LHCB2 | Photosynthesis.photophosphorylation.photosystem... | 0.02 | OrthoFinder output from all 47 species | |
Cre12.g548400 | LHCB2.2, LHCB2 | Photosynthesis.photophosphorylation.photosystem... | 0.02 | OrthoFinder output from all 47 species | |
Cre12.g548950 | LHCB2.2, LHCB2 | Photosynthesis.photophosphorylation.photosystem... | 0.02 | OrthoFinder output from all 47 species | |
Cre16.g673650 | LHCB5 | Photosynthesis.photophosphorylation.photosystem... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g00552 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Dac_g21074 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.01 | OrthoFinder output from all 47 species | |
Dac_g29163 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.01 | OrthoFinder output from all 47 species | |
Dac_g29164 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.01 | OrthoFinder output from all 47 species | |
Dac_g32133 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.01 | OrthoFinder output from all 47 species | |
Dcu_g04335 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.01 | OrthoFinder output from all 47 species | |
Dcu_g06028 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g31165 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g31946 | LHCB3*1, LHCB3 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g31947 | LHCB1.3, CAB140,... | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g41148 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g49339 | LHCB3*1, LHCB3 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.04 | OrthoFinder output from all 47 species | |
Dde_g18807 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Ehy_g09693 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g26492 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.01 | OrthoFinder output from all 47 species | |
GSVIVT01003201001 | LHCB3*1, LHCB3 | Chlorophyll a-b binding protein 3, chloroplastic... | 0.08 | OrthoFinder output from all 47 species | |
GSVIVT01030053001 | LHCB2.3, LHCB2, LHCB2.4 | Chlorophyll a-b binding protein 151, chloroplastic... | 0.06 | OrthoFinder output from all 47 species | |
Gb_05837 | LHCB2.3, LHCB2, LHCB2.4 | component LHCb1/2/3 of LHC-II complex | 0.03 | OrthoFinder output from all 47 species | |
Gb_23731 | LHCB1.5, LHB1B2 | component LHCb1/2/3 of LHC-II complex | 0.03 | OrthoFinder output from all 47 species | |
Gb_30379 | LHCB5 | Chlorophyll a-b binding protein CP26, chloroplastic... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os01g41710.1 | LHCB1.5, LHB1B2,... | component LHCb1/2/3 of LHC-II complex | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os03g39610.1 | LHCB2.2, LHCB2,... | component LHCb1/2/3 of LHC-II complex | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os07g37550.1 | LHCB3*1, LHCB3,... | component LHCb1/2/3 of LHC-II complex | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os09g17740.1 | LHCB1.5, LHB1B2,... | component LHCb1/2/3 of LHC-II complex | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os11g13890.1 | LHCB5, LOC_Os11g13890 | component LHCb5 of LHC-II complex | 0.03 | OrthoFinder output from all 47 species | |
Len_g17713 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Len_g20862 | LHCB1.5, LHB1B2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
Len_g27642 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.01 | OrthoFinder output from all 47 species | |
MA_10431300g0020 | LHCB2.2, LHCB2 | component LHCb1/2/3 of LHC-II complex | 0.01 | OrthoFinder output from all 47 species | |
MA_131587g0010 | LHCB1.4, LHB1B1 | component LHCb1/2/3 of LHC-II complex | 0.01 | OrthoFinder output from all 47 species | |
MA_176279g0010 | LHCB5 | component LHCb5 of LHC-II complex | 0.02 | OrthoFinder output from all 47 species | |
MA_267089g0010 | LHCB2.1, LHCB2 | Chlorophyll a-b binding protein type I, chloroplastic... | 0.02 | OrthoFinder output from all 47 species | |
MA_97315g0010 | LHCB1.5, LHB1B2 | component LHCb1/2/3 of LHC-II complex | 0.01 | OrthoFinder output from all 47 species | |
Msp_g08155 | LHCB3*1, LHCB3 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.01 | OrthoFinder output from all 47 species | |
Msp_g11796 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Msp_g29799 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.01 | OrthoFinder output from all 47 species | |
Msp_g29800 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.01 | OrthoFinder output from all 47 species | |
Msp_g48203 | LHCB1.5, LHB1B2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.01 | OrthoFinder output from all 47 species | |
Nbi_g01819 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Nbi_g05167 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.01 | OrthoFinder output from all 47 species | |
Nbi_g15665 | LHCB3*1, LHCB3 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.01 | OrthoFinder output from all 47 species | |
Ore_g15308 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Ore_g21027 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.01 | OrthoFinder output from all 47 species | |
Ore_g32299 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.01 | OrthoFinder output from all 47 species | |
Ore_g35944 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Ore_g41462 | LHCB3*1, LHCB3 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.01 | OrthoFinder output from all 47 species | |
Pir_g52168 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.01 | OrthoFinder output from all 47 species | |
Pnu_g10162 | CAB3, AB180, LHCB1.2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.01 | OrthoFinder output from all 47 species | |
Pp3c21_3950V3.1 | LHCB2.3, LHCB2,... | photosystem II light harvesting complex gene 2.1 | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g49652 | LHCB1.4, LHB1B1 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0086.g018412 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.01 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0184.g024981 | LHCB3*1, LHCB3 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g08056 | No alias | component *(LHCb5) of LHC-II complex & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Solyc02g070970.1.1 | LHCB1.3, CAB140,... | component LHCb1/2/3 of LHC-II complex | 0.04 | OrthoFinder output from all 47 species | |
Solyc02g071010.1.1 | LHCB1.3, CAB140,... | component LHCb1/2/3 of LHC-II complex | 0.03 | OrthoFinder output from all 47 species | |
Solyc03g005770.3.1 | LHCB1.3, CAB140,... | component LHCb1/2/3 of LHC-II complex | 0.03 | OrthoFinder output from all 47 species | |
Solyc06g063370.3.1 | LHCB5, Solyc06g063370 | component LHCb5 of LHC-II complex | 0.02 | OrthoFinder output from all 47 species | |
Solyc07g047850.3.1 | LHCB2.3, LHCB2,... | component LHCb1/2/3 of LHC-II complex | 0.03 | OrthoFinder output from all 47 species | |
Solyc07g063600.3.1 | LHCB3*1, LHCB3,... | component LHCb1/2/3 of LHC-II complex | 0.03 | OrthoFinder output from all 47 species | |
Solyc12g011450.2.1 | LHCB3*1, LHCB3,... | component LHCb1/2/3 of LHC-II complex | 0.02 | OrthoFinder output from all 47 species | |
Spa_g04947 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Spa_g12575 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g12576 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g12577 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.01 | OrthoFinder output from all 47 species | |
Spa_g17778 | LHCB3*1, LHCB3 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g22371 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.01 | OrthoFinder output from all 47 species | |
Spa_g29043 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Spa_g41881 | LHCB1.5, LHB1B2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
Tin_g04406 | LHCB3*1, LHCB3 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.04 | OrthoFinder output from all 47 species | |
Tin_g08938 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g12536 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g32122 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g41925 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e004940_P001 | LHCB2.3, LHCB2,... | component LHCb1/2/3 of LHC-II complex | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e004941_P001 | LHCB2.3, LHCB2,... | component LHCb1/2/3 of LHC-II complex | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e011045_P002 | LHCB5, Zm00001e011045 | component LHCb5 of LHC-II complex | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e020627_P001 | LHCB1.5, LHB1B2,... | component LHCb1/2/3 of LHC-II complex | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e032450_P001 | LHCB1.5, LHB1B2,... | Chlorophyll a-b binding protein, chloroplastic OS=Zea... | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e034922_P001 | LHCB1.5, LHB1B2,... | Chlorophyll a-b binding protein 1, chloroplastic OS=Zea... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e035249_P001 | LHCB3*1, LHCB3,... | component LHCb1/2/3 of LHC-II complex | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR022796 | Chloroa_b-bind | 64 | 229 |
No external refs found! |