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Mp7g04840.1 (PDE318)


Aliases : PDE318

Description : Nucleolar GTP-binding protein 1 OS=Arabidopsis thaliana (sp|q9c6i8|nog1_arath : 125.0)


Gene families : OG0006383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006383_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp7g04840.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00146270 PDE318,... Nucleolar GTP-binding protein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Aob_g14248 PDE318 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cre08.g384355 No alias No description available 0.04 OrthoFinder output from all 47 species
Dde_g02181 PDE318 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01022468001 PDE318 Nucleolar GTP-binding protein 1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
LOC_Os08g06230.1 PDE318, LOC_Os08g06230 Nucleolar GTP-binding protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Sam_g18094 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g090460.3.1 PDE318, Solyc09g090460 Nucleolar GTP-binding protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008649 rRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
InterPro domains Description Start Stop
IPR030389 G_FEOB_dom 290 345
IPR010674 NOG1_Rossman_fold_dom 354 411
IPR041623 NOG1_N 126 283
No external refs found!