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  5. LOC_Os04g49550

LOC_Os04g49550 (Os04g0585000)


Aliases : Os04g0585000

Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING Encodes a putative RING-H2 finger protein RHA3b. RING-H2 finger A3B (RHA3B)


Gene families : OG_01_0000002 (Gene family) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os04g49550
Cluster HCCA cluster: Cluster_265

Target Alias Description ECC score Gene Family Method Actions
AT1G04360 No alias RING/U-box superfamily protein 0.02 Gene family
AT1G35330 No alias RING/U-box superfamily protein 0.02 Gene family
AT1G49230 No alias RING/U-box superfamily protein 0.02 Gene family
AT1G72220 No alias RING/U-box superfamily protein 0.03 Gene family
AT2G17450 RHA3A RING-H2 finger A3A 0.02 Gene family
AT2G35000 No alias RING/U-box superfamily protein 0.04 Gene family
AT2G37580 No alias RING/U-box superfamily protein 0.02 Gene family
AT2G42350 No alias RING/U-box superfamily protein 0.02 Gene family
AT2G42360 No alias RING/U-box superfamily protein 0.04 Gene family
AT3G18773 No alias RING/U-box superfamily protein 0.02 Gene family
AT3G62690 ATL5 AtL5 0.02 Gene family
AT4G15975 No alias RING/U-box superfamily protein 0.03 Gene family
AT4G40070 No alias RING/U-box superfamily protein 0.02 Gene family
AT5G05280 No alias RING/U-box superfamily protein 0.02 Gene family
AT5G42200 No alias RING/U-box superfamily protein 0.02 Gene family
AT5G66070 No alias RING/U-box superfamily protein 0.02 Gene family
GSVIVT01005189001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
GSVIVT01026703001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os01g53500 Os01g0736600 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os02g15080 Os02g0248900 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
LOC_Os02g36330 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
LOC_Os02g49710 No alias No description available 0.02 Gene family
LOC_Os06g08820 Os06g0187300 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os06g09310 Os06g0192800 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
LOC_Os06g34530 Os06g0536100 No description available 0.03 Gene family
LOC_Os06g34610 Os06g0537100 No description available 0.02 Gene family
LOC_Os08g37760 Os08g0484200 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
MA_10021g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_10072804g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
MA_10106144g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_10426834g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_10429091g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_10436028g0020 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_1115518g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_125507g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_126287g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_129306g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_17390g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_222729g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_373963g0010 No alias No description available 0.02 Gene family
MA_41514g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_42543g0010 No alias No description available 0.01 Gene family
MA_5319g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
MA_552961g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
MA_634100g0010 No alias No description available 0.01 Gene family
MA_8693914g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
MA_9521306g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Smo137213 PACid_15418424 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
Smo423895 PACid_15402451 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Smo438800 PACid_15401761 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
Solyc01g081040.3.1 Solyc01g081040.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc01g100095.1.1 Solyc01g100095.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Solyc01g100100.3.1 Solyc01g100100.3 No description available 0.02 Gene family
Solyc02g086950.1.1 Solyc02g086950.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc03g033330.3.1 Solyc03g033330.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc07g053420.3.1 Solyc07g053420.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc08g076830.1.1 Solyc08g076830.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Solyc10g008080.2.1 Solyc10g008080.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc10g011880.1.1 Solyc10g011880.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc10g081790.1.1 Solyc10g081790.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d000390 GRMZM2G312078 No description available 0.03 Gene family
Zm00001d002491 GRMZM2G090279 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d002535 GRMZM2G146847 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Zm00001d003497 GRMZM2G171277 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Zm00001d006368 GRMZM2G164426 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
Zm00001d007609 GRMZM2G041549 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d013110 GRMZM2G028188 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d016104 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d016139 GRMZM2G098925 No description available 0.02 Gene family
Zm00001d016140 GRMZM2G358711 No description available 0.07 Gene family
Zm00001d016142 GRMZM2G324111 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Zm00001d016682 GRMZM5G860214 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Zm00001d017645 GRMZM2G057789 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL8 0.02 Gene family
Zm00001d017923 No alias No description available 0.02 Gene family
Zm00001d020789 GRMZM2G082653 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.08 Gene family
Zm00001d027685 GRMZM2G056804 No description available 0.09 Gene family
Zm00001d029763 GRMZM2G083382 No description available 0.03 Gene family
Zm00001d031880 No alias No description available 0.04 Gene family
Zm00001d037019 GRMZM2G026562 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL43 0.05 Gene family
Zm00001d037095 GRMZM2G416750 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d037192 GRMZM2G329195 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d037300 GRMZM2G324375 No description available 0.04 Gene family
Zm00001d039375 GRMZM2G386584 No description available 0.03 Gene family
Zm00001d043050 GRMZM2G426613 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d045051 GRMZM2G478553 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d046151 GRMZM2G121143 No description available 0.04 Gene family
Zm00001d050798 GRMZM2G044773 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d051501 GRMZM2G081285 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL8 0.01 Gene family
Zm00001d051894 GRMZM2G146228 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 110 153
No external refs found!