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  5. Mp7g00700.1

Mp7g00700.1 (TUBG1)


Aliases : TUBG1

Description : gamma tubulin component TUG1 of gamma-Tubulin ring complex (gamma-TuRC)


Gene families : OG0003561 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003561_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp7g00700.1
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AT3G61650 TUBG1 gamma-tubulin 0.02 OrthoFinder output from all 47 species
Als_g12552 TUBG1 gamma tubulin component *(TUG1) of gamma-Tubulin ring... 0.02 OrthoFinder output from all 47 species
Aop_g07894 TUBG1 gamma tubulin component *(TUG1) of gamma-Tubulin ring... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000093.121 TUBG1 Tubulin gamma chain OS=Physcomitrella patens subsp. patens 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000093.122 TUBG2, ATGCP2, GCP2 Tubulin gamma chain OS=Physcomitrella patens subsp. patens 0.03 OrthoFinder output from all 47 species
Cre06.g299300 TUBG1 Cytoskeleton.microtubular network.microtubule Tubulin... 0.08 OrthoFinder output from all 47 species
Dcu_g19688 TUBG1 gamma tubulin component *(TUG1) of gamma-Tubulin ring... 0.04 OrthoFinder output from all 47 species
GSVIVT01027050001 TUBG1 Cytoskeleton.microtubular network.microtubule Tubulin... 0.02 OrthoFinder output from all 47 species
LOC_Os05g06450.1 TUBG1, LOC_Os05g06450 gamma tubulin component TUG1 of gamma-Tubulin ring... 0.02 OrthoFinder output from all 47 species
Solyc03g111380.3.1 TUBG1, Solyc03g111380 gamma tubulin component TUG1 of gamma-Tubulin ring... 0.03 OrthoFinder output from all 47 species
Spa_g18001 TUBG1 gamma tubulin component *(TUG1) of gamma-Tubulin ring... 0.02 OrthoFinder output from all 47 species
Tin_g00984 TUBG1 gamma tubulin component *(TUG1) of gamma-Tubulin ring... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0002161 aminoacyl-tRNA editing activity IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043138 3'-5' DNA helicase activity IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 264 393
IPR003008 Tubulin_FtsZ_GTPase 4 214
No external refs found!