- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : PSRP5
Description : component psPSRP5 of large ribosomal subunit proteome
Gene families : OG0007652 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007652_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Mp6g16600.1 | |
| Cluster | HCCA: Cluster_32 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00039p00213540 | PSRP5,... | Protein biosynthesis.organelle translation... | 0.08 | OrthoFinder output from all 47 species | |
| AT3G56910 | PSRP5 | plastid-specific 50S ribosomal protein 5 | 0.34 | OrthoFinder output from all 47 species | |
| Aev_g35452 | PSRP5 | component *(cL37) of large plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
| Ala_g20889 | PSRP5 | component *(cL37) of large plastid ribosomal-subunit... | 0.18 | OrthoFinder output from all 47 species | |
| Als_g21728 | PSRP5 | component *(cL37) of large plastid ribosomal-subunit... | 0.13 | OrthoFinder output from all 47 species | |
| Aob_g03750 | No alias | component *(cL37) of large plastid ribosomal-subunit... | 0.1 | OrthoFinder output from all 47 species | |
| Aop_g02433 | PSRP5 | component *(cL37) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0004.g008656 | No alias | component *(cL37) of large plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
| Cba_g30507 | PSRP5 | component *(cL37) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g44083 | No alias | component *(cL37) of large plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.06G029200.1 | Ceric.06G029200 | component *(cL37) of large plastid ribosomal-subunit... | 0.14 | OrthoFinder output from all 47 species | |
| Dac_g01920 | PSRP5 | component *(cL37) of large plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g12621 | PSRP5 | component *(cL37) of large plastid ribosomal-subunit... | 0.09 | OrthoFinder output from all 47 species | |
| Dde_g23334 | PSRP5 | component *(cL37) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g01939 | No alias | component *(cL37) of large plastid ribosomal-subunit... | 0.1 | OrthoFinder output from all 47 species | |
| Ehy_g31082 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01025849001 | PSRP5 | Protein biosynthesis.organelle translation... | 0.15 | OrthoFinder output from all 47 species | |
| LOC_Os01g17150.1 | PSRP5, LOC_Os01g17150 | component psPSRP5 of large ribosomal subunit proteome | 0.28 | OrthoFinder output from all 47 species | |
| Len_g02486 | PSRP5 | component *(cL37) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g10082 | PSRP5 | component *(cL37) of large plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
| MA_317435g0010 | PSRP5 | component psPSRP5 of large ribosomal subunit proteome | 0.12 | OrthoFinder output from all 47 species | |
| Msp_g01322 | PSRP5 | component *(cL37) of large plastid ribosomal-subunit... | 0.09 | OrthoFinder output from all 47 species | |
| Nbi_g17871 | PSRP5 | component *(cL37) of large plastid ribosomal-subunit... | 0.08 | OrthoFinder output from all 47 species | |
| Ore_g28770 | PSRP5 | component *(cL37) of large plastid ribosomal-subunit... | 0.1 | OrthoFinder output from all 47 species | |
| Pnu_g08742 | No alias | component *(cL37) of large plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c5_5090V3.1 | Pp3c5_5090 | No annotation | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0019.g007874 | No alias | component *(cL37) of large plastid ribosomal-subunit... | 0.12 | OrthoFinder output from all 47 species | |
| Sam_g06595 | No alias | component *(cL37) of large plastid ribosomal-subunit... | 0.1 | OrthoFinder output from all 47 species | |
| Solyc10g081100.3.1 | PSRP5, Solyc10g081100 | component psPSRP5 of large ribosomal subunit proteome | 0.33 | OrthoFinder output from all 47 species | |
| Spa_g46739 | PSRP5 | component *(cL37) of large plastid ribosomal-subunit... | 0.15 | OrthoFinder output from all 47 species | |
| Tin_g12594 | PSRP5 | component *(cL37) of large plastid ribosomal-subunit... | 0.13 | OrthoFinder output from all 47 species | |
| Zm00001e017391_P001 | PSRP5, Zm00001e017391 | component psPSRP5 of large ribosomal subunit proteome | 0.16 | OrthoFinder output from all 47 species | |
| Zm00001e025476_P001 | PSRP5, Zm00001e025476 | component psPSRP5 of large ribosomal subunit proteome | 0.19 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
| MF | GO:0004418 | hydroxymethylbilane synthase activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006066 | alcohol metabolic process | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006414 | translational elongation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006729 | tetrahydrobiopterin biosynthetic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0008124 | 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
| MF | GO:0016836 | hydro-lyase activity | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0019751 | polyol metabolic process | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | HCCA |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | HCCA |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | HCCA |
| BP | GO:0034311 | diol metabolic process | IEP | HCCA |
| BP | GO:0034312 | diol biosynthetic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0042254 | ribosome biogenesis | IEP | HCCA |
| BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | HCCA |
| BP | GO:0042559 | pteridine-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0046146 | tetrahydrobiopterin metabolic process | IEP | HCCA |
| BP | GO:0046165 | alcohol biosynthetic process | IEP | HCCA |
| BP | GO:0046173 | polyol biosynthetic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | HCCA |
| BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |