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  5. Mp6g13020.1

Mp6g13020.1


Description : B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 135.0)


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp6g13020.1

Target Alias Description ECC score Gene Family Method Actions
Als_g16388 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17290 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13345 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene14009.t1 Aspi01Gene14009 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene31888.t1 Aspi01Gene31888 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15480 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g01658 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_04338 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 90.9) 0.02 OrthoFinder output from all 47 species
Len_g29415 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g08042 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06177 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g09602 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g10958 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29133 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g61856 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07388 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38700 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g19040 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29449 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g47097 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g52159 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016779 nucleotidyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0009306 protein secretion IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0035592 establishment of protein localization to extracellular region IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071692 protein localization to extracellular region IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:0140352 export from cell IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 34 167
IPR002934 Polymerase_NTP_transf_dom 903 938
No external refs found!