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  5. Mp6g12970.1

Mp6g12970.1


Description : RING-HC-class E3 ligase


Gene families : OG0001060 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001060_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp6g12970.1
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00088720 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AT3G47160 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G01520 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g00473 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0136.g050967 No alias E3 ubiquitin ligase & original description: CDS=379-978 0.04 OrthoFinder output from all 47 species
Cba_g07398 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G074300.1 Ceric.04G074300 E3 ubiquitin ligase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.19G061700.1 Ceric.19G061700 E3 ubiquitin ligase & original description:... 0.02 OrthoFinder output from all 47 species
GSVIVT01002021001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
Pir_g01540 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e010920_P002 Zm00001e010920 RING-HC-class E3 ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006013 mannose metabolic process IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!