Mp6g12960.1 (ATDRH1, DRH1)

Aliases : ATDRH1, DRH1

Description : DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis thaliana (sp|q8h136|rh14_arath : 546.0)

Gene families : OG0000636 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000636_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Mp6g12960.1

Target	Alias	Description	ECC score	Gene Family Method
AT3G06480	No alias	DEAD box RNA helicase family protein	0.02	OrthoFinder output from all 47 species
Adi_g020036	ATDRH1, DRH1	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Aev_g42061	ATDRH1, DRH1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g10539	ATDRH1, DRH1	not classified & original description: none	0.01	OrthoFinder output from all 47 species
GSVIVT01017651001	No alias	DEAD-box ATP-dependent RNA helicase 40 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Len_g17375	ATDRH1, DRH1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Len_g51090	No alias	regulatory RNA helicase *(RH20/RH30) of virus...	0.01	OrthoFinder output from all 47 species
MA_19015g0010	No alias	pre-mRNA splicing regulator (DDX5)	0.01	OrthoFinder output from all 47 species
Ore_g08678	ATDRH1, DRH1	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Ore_g19068	No alias	regulatory RNA helicase *(RH20/RH30) of virus...	0.01	OrthoFinder output from all 47 species
Spa_g43704	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	238	405
IPR001650	Helicase_C	443	551

External Links

No external refs found!