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  5. Mp6g09610.1

Mp6g09610.1


Description : small subunit sigma of AP-4 vacuole cargo adaptor complex


Gene families : OG0006894 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006894_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp6g09610.1
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
Aop_g00168 No alias small subunit sigma of AP-4 vacuole cargo adaptor... 0.02 OrthoFinder output from all 47 species
Aspi01Gene10259.t1 Aspi01Gene10259 small subunit sigma of AP-4 vacuole cargo adaptor... 0.02 OrthoFinder output from all 47 species
Dac_g19944 No alias small subunit sigma of AP-4 vacuole cargo adaptor... 0.03 OrthoFinder output from all 47 species
LOC_Os08g30480.1 LOC_Os08g30480 small subunit sigma of AP-4 vacuole cargo adaptor complex 0.03 OrthoFinder output from all 47 species
Ore_g10754 No alias small subunit sigma of AP-4 vacuole cargo adaptor... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007029 endoplasmic reticulum organization IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
CC GO:0030677 ribonuclease P complex IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0033218 amide binding IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902555 endoribonuclease complex IEP HCCA
CC GO:1905348 endonuclease complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR022775 AP_mu_sigma_su 2 141
No external refs found!