Mp6g07340.1

Description : IDN/IDP regulatory protein of DNA methylation pathway

Gene families : OG0002563 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002563_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Mp6g07340.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00012p00230440	RDM12, IDN2,...	Chromatin organisation.DNA methylation.canonical...	0.02	OrthoFinder output from all 47 species
AT3G48670	RDM12, IDN2	XH/XS domain-containing protein	0.03	OrthoFinder output from all 47 species
AT5G59390	No alias	XH/XS domain-containing protein	0.02	OrthoFinder output from all 47 species
MA_16249g0010	No alias	Factor of DNA methylation 1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_9285293g0010	RDM12, IDN2	IDN/IDP regulatory protein of DNA methylation pathway	0.04	OrthoFinder output from all 47 species
Solyc05g054420.4.1	RDM12, IDN2,...	IDN/IDP regulatory protein of DNA methylation pathway	0.02	OrthoFinder output from all 47 species
Solyc06g076210.3.1	Solyc06g076210	IDN/IDP regulatory protein of DNA methylation pathway	0.02	OrthoFinder output from all 47 species
Zm00001e025803_P001	Zm00001e025803	IDN/IDP regulatory protein of DNA methylation pathway	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010629	negative regulation of gene expression	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031047	RNA-mediated gene silencing	IEA	Interproscan
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006298	mismatch repair	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
MF	GO:0030983	mismatched DNA binding	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005381	Znf-XS_domain	48	88
IPR005379	FDM1-5/IDN2_XH	542	676
IPR005380	XS_domain	126	238

External Links

No external refs found!