LOC_Os04g47040 (Os04g0557200)


Aliases : Os04g0557200

Description : 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family TT8 is a regulation factor that acts in a concerted action with TT1, PAP1 and TTG1 on the regulation of flavonoid pathways, namely proanthocyanidin and anthocyanin biosynthesis. Affects dihydroflavonol 4-reductase gene expression. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium. Also important for important for marginal trichome development. TRANSPARENT TESTA 8 (TT8)


Gene families : OG_01_0001148 (Gene family) Phylogenetic Tree(s): OG0001148_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os04g47040
Cluster HCCA cluster: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AT4G09820 BHLH42, TT8 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Gene family
GSVIVT01019750001 No alias No description available 0.02 Gene family
MA_8817954g0010 No alias 27.3.6 RNA.regulation of transcription.bHLH,Basic... 0.02 Gene family
Solyc09g065100.2.1 Solyc09g065100.2 27.3.6 RNA.regulation of transcription.bHLH,Basic... 0.02 Gene family
Zm00001d019170 GRMZM2G042733 27.3.6 RNA.regulation of transcription.bHLH,Basic... 0.02 Gene family
Zm00001d026147 GRMZM5G822829 No description available 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR025610 MYC/MYB_N 21 202
IPR011598 bHLH_dom 384 429
No external refs found!