Description : PITH domain-containing protein At3g04780 OS=Arabidopsis thaliana (sp|q9sqz9|pith1_arath : 230.0)
Gene families : OG0005454 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005454_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Mp6g04670.1 | |
Cluster | HCCA: Cluster_26 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g021261 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aob_g01032 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g01504 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g22017 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0032.g010735 | No alias | not classified & original description: CDS=73-600 | 0.01 | OrthoFinder output from all 47 species | |
Spa_g50576 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0004518 | nuclease activity | IEP | HCCA |
MF | GO:0004527 | exonuclease activity | IEP | HCCA |
BP | GO:0007034 | vacuolar transport | IEP | HCCA |
MF | GO:0008408 | 3'-5' exonuclease activity | IEP | HCCA |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR010400 | PITH_dom | 13 | 156 |
No external refs found! |