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  5. Mp6g03590.1

Mp6g03590.1


Description : canonical RAB5 effector (EREX)


Gene families : OG0002176 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002176_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp6g03590.1

Target Alias Description ECC score Gene Family Method Actions
Aop_g05465 No alias RAB5 canonical effector *(EREX) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0154.g053507 No alias RAB5 canonical effector *(EREX) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.03G023200.1 Ceric.03G023200 RAB5 canonical effector *(EREX) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.23G069700.1 Ceric.23G069700 RAB5 canonical effector *(EREX) & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g09457 No alias RAB5 canonical effector *(EREX) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g04032 No alias RAB5 canonical effector *(EREX) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08838 No alias RAB5 canonical effector *(EREX) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01017363001 No alias Vesicle trafficking.regulation of membrane tethering and... 0.04 OrthoFinder output from all 47 species
GSVIVT01035873001 No alias Vesicle trafficking.regulation of membrane tethering and... 0.07 OrthoFinder output from all 47 species
LOC_Os06g43560.1 LOC_Os06g43560 canonical RAB5 effector (EREX) 0.02 OrthoFinder output from all 47 species
Lfl_g04197 No alias RAB5 canonical effector *(EREX) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05595 No alias RAB5 canonical effector *(EREX) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01046 No alias RAB5 canonical effector *(EREX) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01675 No alias RAB5 canonical effector *(EREX) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g58076 No alias RAB5 canonical effector *(EREX) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63973 No alias RAB5 canonical effector *(EREX) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e030469_P004 Zm00001e030469 canonical RAB5 effector (EREX) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0035091 phosphatidylinositol binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001683 PX_dom 70 165
No external refs found!