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  5. Mp6g01640.1

Mp6g01640.1 (AtTLP3, TLP3)


Aliases : AtTLP3, TLP3

Description : transcription factor (TUB)


Gene families : OG0000251 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000251_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp6g01640.1
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00040910 TLP10, AtTLP10,... RNA biosynthesis.transcriptional activation.TUB... 0.02 OrthoFinder output from all 47 species
AMTR_s00130p00115490 AtTLP7, TLP7,... RNA biosynthesis.transcriptional activation.TUB... 0.03 OrthoFinder output from all 47 species
AT1G53320 AtTLP7, TLP7 tubby like protein 7 0.03 OrthoFinder output from all 47 species
Adi_g098655 AtTLP1, TLP1 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115192 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g05261 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g33929 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01968 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g18314 TLP10, AtTLP10 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17127 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01271 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11343 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene10994.t1 AtTLP3, TLP3,... TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72676.t1 AtTLP3, TLP3,... TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15696 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g16858 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.21G026300.1 AtTLP3, TLP3,... TUB-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020603.38 AtTLP5, TLP5 RNA biosynthesis.transcriptional activation.TUB... 0.01 OrthoFinder output from all 47 species
Dcu_g03958 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g06633 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24072 TLP10, AtTLP10 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g64700.2 TLP10, AtTLP10,... transcription factor (TUB) 0.03 OrthoFinder output from all 47 species
LOC_Os05g36190.1 TLP10, AtTLP10,... transcription factor (TUB) 0.03 OrthoFinder output from all 47 species
Len_g01171 TLP10, AtTLP10 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g02328 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Len_g04744 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Len_g17746 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_10430830g0020 TLP10, AtTLP10 transcription factor (TUB) 0.02 OrthoFinder output from all 47 species
Nbi_g03652 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01637 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04396 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18593 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003029 AtTLP3, TLP3 TUB-type transcription factor & original description: CDS=1-1392 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0118.g021211 AtTLP3, TLP3 TUB-type transcription factor & original description: CDS=126-977 0.03 OrthoFinder output from all 47 species
Smo85745 AtTLP3, TLP3 RNA biosynthesis.transcriptional activation.TUB... 0.03 OrthoFinder output from all 47 species
Solyc10g046970.2.1 TLP10, AtTLP10,... transcription factor (TUB) 0.04 OrthoFinder output from all 47 species
Zm00001e023326_P001 TLP2, AtTLP2,... transcription factor (TUB) 0.02 OrthoFinder output from all 47 species
Zm00001e024284_P002 TLP10, AtTLP10,... transcription factor (TUB) 0.03 OrthoFinder output from all 47 species
Zm00001e024653_P002 AtTLP1, TLP1,... transcription factor (TUB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 54 102
IPR000007 Tubby_C 118 416
No external refs found!