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  5. Mp6g01090.1

Mp6g01090.1


Description : NUP205 scaffold nucleoporin of nuclear pore complex


Gene families : OG0003848 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003848_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp6g01090.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g011594 No alias scaffold nucleoporin of nuclear pore complex *(NUP205) &... 0.01 OrthoFinder output from all 47 species
Aev_g33320 No alias scaffold nucleoporin of nuclear pore complex *(NUP205) &... 0.02 OrthoFinder output from all 47 species
Als_g05767 No alias scaffold nucleoporin of nuclear pore complex *(NUP205) &... 0.02 OrthoFinder output from all 47 species
Aob_g23782 No alias scaffold nucleoporin of nuclear pore complex *(NUP205) &... 0.02 OrthoFinder output from all 47 species
Ceric.36G007000.1 Ceric.36G007000 scaffold nucleoporin of nuclear pore complex *(NUP205) &... 0.09 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000880.31 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre13.g578100 No alias No description available 0.08 OrthoFinder output from all 47 species
Dcu_g12341 No alias scaffold nucleoporin of nuclear pore complex *(NUP205) &... 0.04 OrthoFinder output from all 47 species
Dde_g01776 No alias scaffold nucleoporin of nuclear pore complex *(NUP205) &... 0.03 OrthoFinder output from all 47 species
Ehy_g07967 No alias scaffold nucleoporin of nuclear pore complex *(NUP205) &... 0.04 OrthoFinder output from all 47 species
GSVIVT01015528001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.05 OrthoFinder output from all 47 species
Gb_31636 No alias NUP205 scaffold nucleoporin of nuclear pore complex 0.04 OrthoFinder output from all 47 species
LOC_Os02g10790.1 LOC_Os02g10790 NUP205 scaffold nucleoporin of nuclear pore complex 0.11 OrthoFinder output from all 47 species
LOC_Os02g10794.1 LOC_Os02g10794 Nuclear pore complex protein NUP205 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Lfl_g03521 No alias scaffold nucleoporin of nuclear pore complex *(NUP205) &... 0.03 OrthoFinder output from all 47 species
MA_102119g0010 No alias Nuclear pore complex protein NUP205 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_10430391g0010 No alias Nuclear pore complex protein NUP205 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_10433042g0010 No alias Nuclear pore complex protein NUP205 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_10433605g0010 No alias Nuclear pore complex protein NUP205 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_23099g0010 No alias Nuclear pore complex protein NUP205 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_585707g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g17338 No alias scaffold nucleoporin of nuclear pore complex *(NUP205) &... 0.02 OrthoFinder output from all 47 species
Pir_g61394 No alias scaffold nucleoporin of nuclear pore complex *(NUP205) &... 0.03 OrthoFinder output from all 47 species
Ppi_g08343 No alias scaffold nucleoporin of nuclear pore complex *(NUP205) &... 0.02 OrthoFinder output from all 47 species
Smo439663 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder output from all 47 species
Solyc12g006480.2.1 Solyc12g006480 NUP205 scaffold nucleoporin of nuclear pore complex 0.05 OrthoFinder output from all 47 species
Tin_g04761 No alias scaffold nucleoporin of nuclear pore complex *(NUP205) &... 0.04 OrthoFinder output from all 47 species
Zm00001e014006_P001 Zm00001e014006 NUP205 scaffold nucleoporin of nuclear pore complex 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
InterPro domains Description Start Stop
IPR021827 Nup186/Nup192/Nup205 3 1617
No external refs found!