LOC_Os04g46440 (Os04g0550200)


Aliases : Os04g0550200

Description : 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os04g46440

Target Alias Description ECC score Gene Family Method Actions
AT1G21910 DREB26 Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT1G22810 No alias Integrase-type DNA-binding superfamily protein 0.01 Gene family
AT1G33760 No alias Integrase-type DNA-binding superfamily protein 0.01 Gene family
AT1G72360 HRE1 Integrase-type DNA-binding superfamily protein 0.07 Gene family
AT1G77640 No alias Integrase-type DNA-binding superfamily protein 0.01 Gene family
AT2G25820 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT3G23220 No alias Integrase-type DNA-binding superfamily protein 0.01 Gene family
AT5G51190 No alias Integrase-type DNA-binding superfamily protein 0.01 Gene family
GSVIVT01013903001 No alias No description available 0.05 Gene family
Solyc01g108240.3.1 Solyc01g108240.3 No description available 0.01 Gene family
Solyc02g077370.1.1 Solyc02g077370.1 No description available 0.02 Gene family
Solyc03g093610.1.1 Solyc03g093610.1 No description available 0.01 Gene family
Solyc05g052030.1.1 Solyc05g052030.1 No description available 0.04 Gene family
Solyc06g082590.1.1 Solyc06g082590.1 No description available 0.02 Gene family
Solyc10g006130.1.1 Solyc10g006130.1 No description available 0.02 Gene family
Solyc10g050960.2.1 Solyc10g050960.2 No description available 0.01 Gene family
Solyc10g050970.1.1 Solyc10g050970.1 No description available 0.01 Gene family
Solyc12g008350.2.1 Solyc12g008350.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d002744 GRMZM2G172936 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Zm00001d026182 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d026271 GRMZM2G438202 No description available 0.03 Gene family
Zm00001d039324 GRMZM2G142179 No description available 0.06 Gene family
Zm00001d053859 GRMZM2G052720 No description available 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 46 95
No external refs found!