LOC_Os04g46250 (Os04g0547600)


Aliases : Os04g0547600

Description : No description available


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os04g46250

Target Alias Description ECC score Gene Family Method Actions
AT1G75490 No alias Integrase-type DNA-binding superfamily protein 0.11 Gene family
AT5G18450 No alias Integrase-type DNA-binding superfamily protein 0.04 Gene family
GSVIVT01009801001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.11 Gene family
GSVIVT01034563001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os01g10370 Os01g0200600 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os07g47790 Os07g0674800 No description available 0.02 Gene family
MA_19420g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_19683g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_329325g0010 No alias No description available 0.02 Gene family
MA_42369g0010 No alias No description available 0.02 Gene family
MA_55226g0020 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_912855g0010 No alias No description available 0.02 Gene family
MA_938274g0010 No alias No description available 0.02 Gene family
Solyc02g090790.1.1 Solyc02g090790.1 No description available 0.03 Gene family
Solyc03g117130.3.1 Solyc03g117130.3 No description available 0.02 Gene family
Solyc04g050750.1.1 Solyc04g050750.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.13 Gene family
Solyc04g080910.1.1 Solyc04g080910.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc07g054220.1.1 Solyc07g054220.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc08g078170.1.1 Solyc08g078170.1 No description available 0.02 Gene family
Zm00001d002760 GRMZM2G475678 No description available 0.09 Gene family
Zm00001d002761 GRMZM5G805505 No description available 0.1 Gene family
Zm00001d008665 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.12 Gene family
Zm00001d009622 GRMZM2G100982 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d010175 GRMZM2G457562 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.09 Gene family
Zm00001d017466 GRMZM2G057386 No description available 0.08 Gene family
Zm00001d031673 GRMZM2G309731 No description available 0.15 Gene family
Zm00001d036298 GRMZM2G119865 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.1 Gene family
Zm00001d038320 GRMZM2G100727 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.12 Gene family
Zm00001d045204 GRMZM2G301860 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.11 Gene family
Zm00001d049889 GRMZM2G156737 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 138 188
No external refs found!