LOC_Os04g46240 (Os04g0547500)


Aliases : Os04g0547500

Description : No description available


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os04g46240
Cluster HCCA cluster: Cluster_200

Target Alias Description ECC score Gene Family Method Actions
AT1G06160 ORA59 octadecanoid-responsive Arabidopsis AP2/ERF 59 0.03 Gene family
AT1G12890 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G22190 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT1G28160 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G44830 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G64380 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT2G22200 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT2G31230 ATERF15, ERF15 ethylene-responsive element binding factor 15 0.02 Gene family
AT2G40220 ABI4, SAN5,... Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT2G46310 CRF5 cytokinin response factor 5 0.01 Gene family
AT4G11140 CRF1 cytokinin response factor 1 0.03 Gene family
AT4G13620 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G13910 LEP Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT5G25390 SHN2 Integrase-type DNA-binding superfamily protein 0.02 Gene family
GSVIVT01002262001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
GSVIVT01006277001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
GSVIVT01013924001 No alias No description available 0.02 Gene family
GSVIVT01013931001 No alias No description available 0.02 Gene family
GSVIVT01013934001 No alias No description available 0.03 Gene family
GSVIVT01017315001 No alias No description available 0.04 Gene family
GSVIVT01022277001 No alias No description available 0.02 Gene family
GSVIVT01036228001 No alias No description available 0.03 Gene family
LOC_Os02g13710 Os02g0231000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
LOC_Os03g08460 Os03g0182800 No description available 0.02 Gene family
LOC_Os03g09170 Os03g0191900 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_10432141g0020 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
MA_19420g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_198113g0010 No alias No description available 0.02 Gene family
MA_214063g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_23847g0010 No alias No description available 0.02 Gene family
MA_314205g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
MA_33689g0010 No alias No description available 0.02 Gene family
Solyc01g067540.1.1 Solyc01g067540.1 No description available 0.03 Gene family
Solyc02g077360.1.1 Solyc02g077360.1 No description available 0.03 Gene family
Solyc05g052030.1.1 Solyc05g052030.1 No description available 0.02 Gene family
Solyc06g063070.3.1 Solyc06g063070.3 No description available 0.02 Gene family
Solyc06g065820.3.1 Solyc06g065820.3 No description available 0.04 Gene family
Solyc06g068360.3.1 Solyc06g068360.3 No description available 0.02 Gene family
Solyc06g068830.2.1 Solyc06g068830.2 No description available 0.02 Gene family
Solyc08g008305.1.1 Solyc08g008305.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc11g045680.2.1 Solyc11g045680.2 No description available 0.02 Gene family
Solyc11g045690.2.1 Solyc11g045690.2 No description available 0.02 Gene family
Solyc12g013660.2.1 Solyc12g013660.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc12g056980.1.1 Solyc12g056980.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d008968 GRMZM2G044077 No description available 0.01 Gene family
Zm00001d012584 GRMZM2G132223 No description available 0.02 Gene family
Zm00001d016616 GRMZM2G016434 No description available 0.03 Gene family
Zm00001d022488 GRMZM2G307119 No description available 0.04 Gene family
Zm00001d036298 GRMZM2G119865 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d038001 GRMZM2G093595 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d038584 GRMZM2G020016 No description available 0.02 Gene family
Zm00001d044950 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d046501 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d047860 GRMZM2G007406 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d050948 GRMZM2G120401,... 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 139 189
No external refs found!