LOC_Os04g46220 (Os04g0546800)


Aliases : Os04g0546800

Description : 17.5.2 hormone metabolism.ethylene.signal transduction Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-1). The protein ?//CONTAINS one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os04g46220
Cluster HCCA cluster: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AT1G22190 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G22810 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT1G33760 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT1G43160 RAP2.6 related to AP2 6 0.03 Gene family
AT1G71520 No alias Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT1G77640 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT1G78080 RAP2.4 related to AP2 4 0.03 Gene family
AT2G33710 No alias Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT2G44840 ATERF13, ERF13, EREBP ethylene-responsive element binding factor 13 0.04 Gene family
AT3G23220 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT3G23230 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT4G17490 ERF-6-6, ERF6, ATERF6 ethylene responsive element binding factor 6 0.05 Gene family
AT4G17500 ERF-1, ATERF-1 ethylene responsive element binding factor 1 0.03 Gene family
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G21960 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G51190 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT5G61590 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT5G61890 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G64750 ABR1 Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G67190 DEAR2 DREB and EAR motif protein 2 0.03 Gene family
GSVIVT01013916001 No alias No description available 0.02 Gene family
GSVIVT01013931001 No alias No description available 0.03 Gene family
GSVIVT01013935001 No alias No description available 0.03 Gene family
GSVIVT01014291001 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
GSVIVT01015037001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
GSVIVT01018270001 No alias No description available 0.03 Gene family
GSVIVT01018271001 No alias No description available 0.03 Gene family
GSVIVT01020584001 No alias No description available 0.04 Gene family
GSVIVT01021060001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
GSVIVT01021098001 No alias No description available 0.03 Gene family
GSVIVT01021146001 No alias No description available 0.04 Gene family
GSVIVT01028314001 No alias No description available 0.04 Gene family
GSVIVT01028315001 No alias No description available 0.03 Gene family
GSVIVT01031747001 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
GSVIVT01032983001 No alias No description available 0.02 Gene family
GSVIVT01034563001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
GSVIVT01035098001 No alias No description available 0.02 Gene family
GSVIVT01035502001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os01g58420 Os01g0797600 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
LOC_Os02g32140 Os02g0521100 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os02g42585 Os02g0638650 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
LOC_Os03g08460 Os03g0182800 No description available 0.04 Gene family
LOC_Os03g22170 Os03g0341000 No description available 0.02 Gene family
LOC_Os04g56150 Os04g0655700 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os05g41780 Os05g0497300 17.5.2 hormone metabolism.ethylene.signal transduction... 0.05 Gene family
LOC_Os06g40150 Os06g0604000 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os07g22730 Os07g0410300 No description available 0.03 Gene family
LOC_Os07g42510 Os07g0617000 No description available 0.05 Gene family
LOC_Os08g41030 Os08g0521600 No description available 0.02 Gene family
LOC_Os08g44960 No alias 17.5.3 hormone... 0.02 Gene family
LOC_Os09g13940 Os09g0309700 No description available 0.03 Gene family
LOC_Os10g25170 Os10g0390800 No description available 0.02 Gene family
LOC_Os10g38000 Os10g0523900 No description available 0.02 Gene family
LOC_Os11g13840 Os11g0242300 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_10274g0010 No alias No description available 0.02 Gene family
MA_10430769g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
MA_132427g0010 No alias No description available 0.02 Gene family
MA_16778g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_329325g0010 No alias No description available 0.02 Gene family
MA_40048g0010 No alias No description available 0.02 Gene family
MA_4032g0010 No alias No description available 0.03 Gene family
MA_4182g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_55226g0020 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_6447416g0010 No alias No description available 0.02 Gene family
MA_81029g0010 No alias No description available 0.03 Gene family
MA_912855g0010 No alias No description available 0.02 Gene family
MA_938274g0010 No alias No description available 0.02 Gene family
MA_97319g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Smo73155 PACid_15404551 No description available 0.03 Gene family
Solyc01g090560.3.1 Solyc01g090560.3 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc01g108240.3.1 Solyc01g108240.3 No description available 0.02 Gene family
Solyc02g077840.1.1 Solyc02g077840.1 No description available 0.03 Gene family
Solyc02g093130.2.1 Solyc02g093130.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Solyc03g093540.1.1 Solyc03g093540.1 No description available 0.02 Gene family
Solyc03g093610.1.1 Solyc03g093610.1 No description available 0.02 Gene family
Solyc04g007170.3.1 Solyc04g007170.3 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc04g012050.3.1 Solyc04g012050.3 No description available 0.03 Gene family
Solyc04g051360.3.1 Solyc04g051360.3 No description available 0.04 Gene family
Solyc04g054910.3.1 Solyc04g054910.3 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc04g078640.2.1 Solyc04g078640.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.06 Gene family
Solyc05g052030.1.1 Solyc05g052030.1 No description available 0.02 Gene family
Solyc05g052040.1.1 Solyc05g052040.1 No description available 0.02 Gene family
Solyc05g052050.1.1 Solyc05g052050.1 No description available 0.03 Gene family
Solyc06g068830.2.1 Solyc06g068830.2 No description available 0.02 Gene family
Solyc08g066660.1.1 Solyc08g066660.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc09g089930.2.1 Solyc09g089930.2 No description available 0.02 Gene family
Solyc10g006130.1.1 Solyc10g006130.1 No description available 0.02 Gene family
Solyc10g050960.2.1 Solyc10g050960.2 No description available 0.02 Gene family
Solyc10g050970.1.1 Solyc10g050970.1 No description available 0.02 Gene family
Solyc11g042560.1.1 Solyc11g042560.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc12g042210.2.1 Solyc12g042210.2 No description available 0.04 Gene family
Solyc12g056590.2.1 Solyc12g056590.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc12g056980.1.1 Solyc12g056980.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d000179 GRMZM5G889719 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d000339 GRMZM2G174347 No description available 0.05 Gene family
Zm00001d001907 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.05 Gene family
Zm00001d002079 GRMZM2G174917 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Zm00001d002364 GRMZM2G068967 No description available 0.06 Gene family
Zm00001d002760 GRMZM2G475678 No description available 0.02 Gene family
Zm00001d002761 GRMZM5G805505 No description available 0.02 Gene family
Zm00001d002762 GRMZM2G055180 17.5.2 hormone metabolism.ethylene.signal transduction... 0.09 Gene family
Zm00001d003871 GRMZM2G079825 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d005309 No alias No description available 0.03 Gene family
Zm00001d005892 GRMZM2G138396 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
Zm00001d010048 GRMZM2G006745 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d010175 GRMZM2G457562 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d015639 GRMZM2G079653 No description available 0.03 Gene family
Zm00001d016616 GRMZM2G016434 No description available 0.04 Gene family
Zm00001d017462 GRMZM2G466044 17.5.2 hormone metabolism.ethylene.signal transduction... 0.05 Gene family
Zm00001d018305 GRMZM2G110333 No description available 0.03 Gene family
Zm00001d019475 No alias No description available 0.02 Gene family
Zm00001d019734 GRMZM2G123119 No description available 0.07 Gene family
Zm00001d024324 GRMZM2G020054 No description available 0.05 Gene family
Zm00001d026191 GRMZM2G080516 No description available 0.11 Gene family
Zm00001d026271 GRMZM2G438202 No description available 0.04 Gene family
Zm00001d026563 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.05 Gene family
Zm00001d027870 GRMZM2G419901 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d027925 GRMZM2G018984 No description available 0.03 Gene family
Zm00001d027929 No alias No description available 0.05 Gene family
Zm00001d029940 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.09 Gene family
Zm00001d031673 GRMZM2G309731 No description available 0.02 Gene family
Zm00001d031796 GRMZM2G369472 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d036298 GRMZM2G119865 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d038320 GRMZM2G100727 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d038585 GRMZM2G020150 No description available 0.05 Gene family
Zm00001d042593 GRMZM2G307152 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Zm00001d042717 GRMZM2G149756 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Zm00001d043205 GRMZM2G310368 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
Zm00001d045204 GRMZM2G301860 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d049364 GRMZM2G089995 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
Zm00001d052026 GRMZM2G111415 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
Zm00001d052167 GRMZM2G173771 No description available 0.03 Gene family
Zm00001d052229 GRMZM2G029323 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d053195 GRMZM2G076896 No description available 0.05 Gene family
Zm00001d053859 GRMZM2G052720 No description available 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 152 202
No external refs found!