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  5. Mp5g23040.1

Mp5g23040.1


Description : cell cycle replicated DNA checkpoint protein (TopBP1)


Gene families : OG0008047 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008047_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp5g23040.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00057240 evm_27.TU.AmTr_v1... Cell cycle.interphase.DNA... 0.16 OrthoFinder output from all 47 species
AT4G02110 No alias transcription coactivators 0.1 OrthoFinder output from all 47 species
Aspi01Gene28809.t1 Aspi01Gene28809 cell cycle replicated DNA checkpoint protein *(TopBP1) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene28810.t1 Aspi01Gene28810 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0068.g036351 No alias cell cycle replicated DNA checkpoint protein *(TopBP1) &... 0.05 OrthoFinder output from all 47 species
Ceric.15G070200.1 Ceric.15G070200 cell cycle replicated DNA checkpoint protein *(TopBP1) &... 0.25 OrthoFinder output from all 47 species
Cre03.g158464 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01028102001 No alias Cell cycle.interphase.DNA... 0.19 OrthoFinder output from all 47 species
Gb_07881 No alias cell cycle replicated DNA checkpoint protein (TopBP1) 0.21 OrthoFinder output from all 47 species
Gb_07883 No alias BRCT domain-containing protein At4g02110 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Gb_39610 No alias cell cycle replicated DNA checkpoint protein (TopBP1) 0.18 OrthoFinder output from all 47 species
Gb_39611 No alias no hits & (original description: none) 0.2 OrthoFinder output from all 47 species
LOC_Os03g19190.1 LOC_Os03g19190 cell cycle replicated DNA checkpoint protein (TopBP1) 0.1 OrthoFinder output from all 47 species
MA_100135g0010 No alias no hits & (original description: none) 0.19 OrthoFinder output from all 47 species
MA_929730g0010 No alias cell cycle replicated DNA checkpoint protein (TopBP1) 0.17 OrthoFinder output from all 47 species
Nbi_g08424 No alias cell cycle replicated DNA checkpoint protein *(TopBP1) &... 0.05 OrthoFinder output from all 47 species
Smo437359 No alias Cell cycle.interphase.DNA... 0.03 OrthoFinder output from all 47 species
Spa_g06915 No alias cell cycle replicated DNA checkpoint protein *(TopBP1) &... 0.13 OrthoFinder output from all 47 species
Tin_g13316 No alias cell cycle replicated DNA checkpoint protein *(TopBP1) &... 0.1 OrthoFinder output from all 47 species
Zm00001e001412_P002 Zm00001e001412 cell cycle replicated DNA checkpoint protein (TopBP1) 0.05 OrthoFinder output from all 47 species
Zm00001e035929_P001 Zm00001e035929 cell cycle replicated DNA checkpoint protein (TopBP1) 0.15 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000725 recombinational repair IEP HCCA
CC GO:0000776 kinetochore IEP HCCA
CC GO:0000808 origin recognition complex IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031262 Ndc80 complex IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 1286 1336
IPR001357 BRCT_dom 65 140
IPR001357 BRCT_dom 168 231
No external refs found!