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Aliases : MGP
Description : C2H2 zinc finger transcription factor
Gene families : OG0000265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000265_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Mp5g20530.1 | |
| Cluster | HCCA: Cluster_11 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00007p00061550 | JKD,... | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00059p00106830 | IDD2, AtIDD2,... | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.02 | OrthoFinder output from all 47 species | |
| AT3G50700 | IDD2, AtIDD2 | indeterminate(ID)-domain 2 | 0.03 | OrthoFinder output from all 47 species | |
| Als_g12138 | IDD16, AtIDD16 | C2H2 subclass IDD transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.08G030600.1 | IDD2, AtIDD2,... | C2H2 subclass IDD transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01010283001 | IDD5, AtIDD5 | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01020612001 | MGP | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_01996 | MGP | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g06563 | MGP | C2H2 subclass IDD transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g59814 | IDD14, AtIDD14 | C2H2 subclass IDD transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0160.g023894 | MGP | C2H2 subclass IDD transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g15647 | MGP | C2H2 subclass IDD transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g30837 | MGP | C2H2 subclass IDD transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e010319_P001 | IDD4, AtIDD4,... | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
| MF | GO:0009916 | alternative oxidase activity | IEP | HCCA |
| MF | GO:0016679 | oxidoreductase activity, acting on diphenols and related substances as donors | IEP | HCCA |
| MF | GO:0016682 | oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013087 | Znf_C2H2_type | 193 | 215 |
| No external refs found! |