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  5. Mp5g18240.1

Mp5g18240.1


Description : no hits & (original description: none)


Gene families : OG0003000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003000_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp5g18240.1
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AT3G22490 No alias Seed maturation protein 0.03 OrthoFinder output from all 47 species
AT3G22500 ATECP31 Seed maturation protein 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011458 No alias not classified & original description: CDS=379-1194 0.02 OrthoFinder output from all 47 species
Ceric.32G026700.1 Ceric.32G026700 not classified & original description: pacid=50598394... 0.02 OrthoFinder output from all 47 species
GSVIVT01001170001 No alias Late embryogenesis abundant protein D-34 OS=Gossypium hirsutum 0.02 OrthoFinder output from all 47 species
GSVIVT01021881001 No alias Late embryogenesis abundant protein D-34 OS=Gossypium hirsutum 0.02 OrthoFinder output from all 47 species
LOC_Os03g06360.1 LOC_Os03g06360 Late embryogenesis abundant protein D-34 OS=Gossypium... 0.04 OrthoFinder output from all 47 species
LOC_Os03g53620.1 ATECP31, LOC_Os03g53620 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g23350.1 LOC_Os06g23350 Late embryogenesis abundant protein D-34 OS=Gossypium... 0.03 OrthoFinder output from all 47 species
LOC_Os10g29570.1 RAB28, ATRAB28,... no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g18569 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_1400g0010 No alias Late embryogenesis abundant protein D-34 OS=Gossypium... 0.03 OrthoFinder output from all 47 species
MA_216273g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_326206g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_49897g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g25972 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g14470 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43455 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g27233 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14559 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31080 RAB28, ATRAB28 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g56546 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0093.g019098 No alias not classified & original description: CDS=1-975 0.02 OrthoFinder output from all 47 species
Smo84789 No alias Late embryogenesis abundant protein 31 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc09g065360.4.1 Solyc09g065360 Late embryogenesis abundant protein 31 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc09g082100.3.1 Solyc09g082100 Late embryogenesis abundant protein 31 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc09g082110.4.1 Solyc09g082110 Late embryogenesis abundant protein D-34 OS=Gossypium... 0.02 OrthoFinder output from all 47 species
Zm00001e000449_P001 Zm00001e000449 Late embryogenesis abundant protein D-34 OS=Gossypium... 0.02 OrthoFinder output from all 47 species
Zm00001e005665_P002 Zm00001e005665 Late embryogenesis abundant protein D-34 OS=Gossypium... 0.03 OrthoFinder output from all 47 species
Zm00001e005666_P001 Zm00001e005666 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR007011 LEA_SMP_dom 59 112
IPR007011 LEA_SMP_dom 118 174
No external refs found!