1. Home
  2. Species
  3. Marchantia polymorpha
  4. Sequence
  5. Mp5g16300.1

Mp5g16300.1


Description : pre-60S ribosomal subunit export factor (Bud20)


Gene families : OG0003346 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003346_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp5g16300.1
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00161p00051000 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Als_g43314 No alias pre-60S ribosomal-subunit proteome export factor... 0.03 OrthoFinder output from all 47 species
Azfi_s0022.g015896 No alias pre-60S ribosomal-subunit proteome export factor... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001530.2 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre17.g734628 No alias No description available 0.03 OrthoFinder output from all 47 species
Dcu_g03352 No alias pre-60S ribosomal-subunit proteome export factor... 0.18 OrthoFinder output from all 47 species
GSVIVT01033644001 No alias No description available 0.09 OrthoFinder output from all 47 species
LOC_Os08g45040.1 LOC_Os08g45040 pre-60S ribosomal subunit export factor (Bud20) 0.04 OrthoFinder output from all 47 species
Len_g30030 No alias pre-60S ribosomal-subunit proteome export factor... 0.02 OrthoFinder output from all 47 species
Smo149266 No alias No description available 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR022755 Znf_C2H2_jaz 56 82
No external refs found!