Mp5g14000.1 (AtcpRRF, HFP108, cpRRF, RRF)


Aliases : AtcpRRF, HFP108, cpRRF, RRF

Description : RRF translation ribosome recycling factor


Gene families : OG0006870 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006870_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp5g14000.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00103p00070570 AtcpRRF, HFP108,... Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
AT3G63190 AtcpRRF, HFP108,... ribosome recycling factor, chloroplast precursor 0.21 OrthoFinder output from all 47 species
Aev_g21988 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.04 OrthoFinder output from all 47 species
Aev_g21989 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.04 OrthoFinder output from all 47 species
Ala_g12791 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.03 OrthoFinder output from all 47 species
Als_g02938 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.06 OrthoFinder output from all 47 species
Aop_g23021 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.07 OrthoFinder output from all 47 species
Cba_g05774 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.03 OrthoFinder output from all 47 species
Ceric.25G011000.1 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.08 OrthoFinder output from all 47 species
Cre03.g156050 AtcpRRF, HFP108,... Protein biosynthesis.organelle translation... 0.19 OrthoFinder output from all 47 species
Dac_g03594 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.05 OrthoFinder output from all 47 species
Dde_g00377 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.07 OrthoFinder output from all 47 species
GSVIVT01001148001 AtcpRRF, HFP108,... Protein biosynthesis.organelle translation... 0.06 OrthoFinder output from all 47 species
Gb_31542 AtcpRRF, HFP108,... RRF translation ribosome recycling factor 0.02 OrthoFinder output from all 47 species
LOC_Os07g38300.1 AtcpRRF, HFP108,... RRF translation ribosome recycling factor 0.15 OrthoFinder output from all 47 species
Len_g47851 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.11 OrthoFinder output from all 47 species
Msp_g11460 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.06 OrthoFinder output from all 47 species
Nbi_g28974 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.04 OrthoFinder output from all 47 species
Pir_g17819 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.03 OrthoFinder output from all 47 species
Pir_g48097 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.02 OrthoFinder output from all 47 species
Pp3c18_6870V3.1 AtcpRRF, HFP108,... ribosome recycling factor, chloroplast precursor 0.02 OrthoFinder output from all 47 species
Ppi_g10744 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.11 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006320 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.07 OrthoFinder output from all 47 species
Solyc09g065270.3.1 AtcpRRF, HFP108,... RRF translation ribosome recycling factor 0.16 OrthoFinder output from all 47 species
Spa_g44127 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.04 OrthoFinder output from all 47 species
Tin_g00796 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.1 OrthoFinder output from all 47 species
Zm00001e021862_P002 AtcpRRF, HFP108,... RRF translation ribosome recycling factor 0.12 OrthoFinder output from all 47 species
Zm00001e029168_P003 AtcpRRF, HFP108,... RRF translation ribosome recycling factor 0.15 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR023584 Ribosome_recyc_fac_dom 127 286
No external refs found!