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  5. Mp5g12970.1

Mp5g12970.1 (SPT42)


Aliases : SPT42

Description : component SPT4 of SPT4/5 transcription elongation factor complex


Gene families : OG0004229 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004229_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp5g12970.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Aop_g24927 No alias component *(SPT4) of SPT4/5 transcription elongation... 0.02 OrthoFinder output from all 47 species
Cre02.g116300 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.03 OrthoFinder output from all 47 species
LOC_Os07g43060.1 SPT42, LOC_Os07g43060 component SPT4 of SPT4/5 transcription elongation factor complex 0.03 OrthoFinder output from all 47 species
MA_11596g0010 SPT42 component SPT4 of SPT4/5 transcription elongation factor complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005787 signal peptidase complex IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR022800 Spt4/RpoE2_Znf 16 92
No external refs found!