AMTR_s00058p00176500 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00058.166

Description : Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT3 gamma subunit

Gene families : OG_01_0003845 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003845_tree ,
OG_02_0004402 (LandPlants) Phylogenetic Tree(s): OG_02_0004402_tree ,
OG_03_0005436 (SeedPlants) Phylogenetic Tree(s): OG_03_0005436_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00058p00176500
Cluster	HCCA: Cluster_241

Target	Alias	Description	ECC score	Gene Family Method
AT5G26360	No alias	TCP-1/cpn60 chaperonin family protein	0.08	Archaeplastida
Cpa\|evm.model.tig00000615.79	No alias	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.01	Archaeplastida
Cre10.g443250	No alias	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.04	Archaeplastida
GSVIVT01000266001	No alias	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.05	Archaeplastida
GSVIVT01007770001	No alias	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.05	Archaeplastida
Gb_37345	No alias	CCT3 subunit gamma of CCT chaperonin folding complex	0.03	Archaeplastida
LOC_Os02g14929.1	No alias	CCT3 subunit gamma of CCT chaperonin folding complex	0.03	Archaeplastida
LOC_Os06g34690.1	No alias	CCT3 subunit gamma of CCT chaperonin folding complex	0.05	Archaeplastida
MA_37504g0010	No alias	CCT3 subunit gamma of CCT chaperonin folding complex	0.02	Archaeplastida
Mp7g14360.1	No alias	CCT3 subunit gamma of CCT chaperonin folding complex	0.04	Archaeplastida
Pp3c10_13240V3.1	No alias	TCP-1/cpn60 chaperonin family protein	0.03	Archaeplastida
Pp3c12_7550V3.1	No alias	TCP-1/cpn60 chaperonin family protein	0.06	Archaeplastida
Solyc05g056310.3.1	No alias	CCT3 subunit gamma of CCT chaperonin folding complex	0.05	Archaeplastida
Zm00001e000822_P001	No alias	CCT3 subunit gamma of CCT chaperonin folding complex	0.06	Archaeplastida
Zm00001e024916_P001	No alias	CCT3 subunit gamma of CCT chaperonin folding complex	0.07	Archaeplastida
AT5G26360	No alias	TCP-1/cpn60 chaperonin family protein	0.08	LandPlants
GSVIVT01000266001	No alias	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.05	LandPlants
GSVIVT01007770001	No alias	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.04	LandPlants
Gb_37345	No alias	CCT3 subunit gamma of CCT chaperonin folding complex	0.03	LandPlants
LOC_Os02g14929.1	No alias	CCT3 subunit gamma of CCT chaperonin folding complex	0.02	LandPlants
LOC_Os06g34690.1	No alias	CCT3 subunit gamma of CCT chaperonin folding complex	0.05	LandPlants
MA_37504g0010	No alias	CCT3 subunit gamma of CCT chaperonin folding complex	0.02	LandPlants
Mp7g14360.1	No alias	CCT3 subunit gamma of CCT chaperonin folding complex	0.04	LandPlants
Pp3c10_13240V3.1	No alias	TCP-1/cpn60 chaperonin family protein	0.03	LandPlants
Pp3c12_7550V3.1	No alias	TCP-1/cpn60 chaperonin family protein	0.05	LandPlants
Solyc05g056310.3.1	No alias	CCT3 subunit gamma of CCT chaperonin folding complex	0.05	LandPlants
Zm00001e000822_P001	No alias	CCT3 subunit gamma of CCT chaperonin folding complex	0.05	LandPlants
Zm00001e024916_P001	No alias	CCT3 subunit gamma of CCT chaperonin folding complex	0.06	LandPlants
AT5G26360	No alias	TCP-1/cpn60 chaperonin family protein	0.08	SeedPlants
GSVIVT01000266001	No alias	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.05	SeedPlants
GSVIVT01007770001	No alias	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.04	SeedPlants
Gb_37345	No alias	CCT3 subunit gamma of CCT chaperonin folding complex	0.03	SeedPlants
LOC_Os02g14929.1	No alias	CCT3 subunit gamma of CCT chaperonin folding complex	0.02	SeedPlants
LOC_Os06g34690.1	No alias	CCT3 subunit gamma of CCT chaperonin folding complex	0.05	SeedPlants
MA_37504g0010	No alias	CCT3 subunit gamma of CCT chaperonin folding complex	0.02	SeedPlants
Solyc05g056310.3.1	No alias	CCT3 subunit gamma of CCT chaperonin folding complex	0.05	SeedPlants
Zm00001e000822_P001	No alias	CCT3 subunit gamma of CCT chaperonin folding complex	0.05	SeedPlants
Zm00001e024916_P001	No alias	CCT3 subunit gamma of CCT chaperonin folding complex	0.06	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002423	Cpn60/TCP-1	31	524

External Links

No external refs found!

AMTR_s00058p00176500 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation