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  5. Mp5g05940.1

Mp5g05940.1


Description : transcription factor (BBX-DBB)


Gene families : OG0000403 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000403_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp5g05940.1

Target Alias Description ECC score Gene Family Method Actions
AT1G06040 STO B-box zinc finger family protein 0.03 OrthoFinder output from all 47 species
Adi_g001540 STH not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g057496 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g080080 No alias BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g081474 STO BBX class-IV transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene09321.t1 Aspi01Gene09321 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g009705 No alias BBX class-IV transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ceric.39G035500.1 Ceric.39G035500 BBX class-IV transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cre03.g182700 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g37029 No alias BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g10773 No alias BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g21663 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g00412 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15051 STO BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo102790 ATCOL4, COL4 RNA biosynthesis.transcriptional activation.C2C2... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000315 Znf_B-box 3 42
IPR000315 Znf_B-box 53 92
No external refs found!