LOC_Os04g43910 (Os04g0519700)


Aliases : Os04g0519700

Description : 27.3.4 RNA.regulation of transcription.ARF, Auxin Response Factor family Involved in root cap cell differentiation. auxin response factor 10 (ARF10)


Gene families : OG_01_0000037 (Gene family) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os04g43910
Cluster HCCA cluster: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AT1G19850 MP, IAA24, ARF5 Transcriptional factor B3 family protein /... 0.05 Gene family
AT1G34170 ARF13 AUXIN RESPONSE FACTOR 13 0.03 Gene family
AT2G28350 ARF10 auxin response factor 10 0.02 Gene family
AT5G62000 HSS, ARF1-BP, ARF2, ORE14 auxin response factor 2 0.03 Gene family
GSVIVT01016266001 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.04 Gene family
GSVIVT01025691001 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.04 Gene family
Solyc02g037530.3.1 Solyc02g037530.3 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Solyc07g016180.3.1 Solyc07g016180.3 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Solyc08g008380.3.1 Solyc08g008380.3 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Zm00001d014507 GRMZM2G013663 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.09 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR010525 Auxin_resp 276 359
IPR003340 B3_DNA-bd 121 222
No external refs found!