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Aliases : HCF136
Description : HCF136 protein involved in PS-II assembly
Gene families : OG0006586 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006586_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00029p00083110 | HCF136,... | Photosynthesis.photophosphorylation.photosystem... | 0.13 | OrthoFinder output from all 47 species | |
| AT5G23120 | HCF136 | photosystem II stability/assembly factor, chloroplast (HCF136) | 0.11 | OrthoFinder output from all 47 species | |
| Adi_g023753 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.12 | OrthoFinder output from all 47 species | |
| Aev_g35613 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.08 | OrthoFinder output from all 47 species | |
| Ala_g31805 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.09 | OrthoFinder output from all 47 species | |
| Als_g23347 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.07 | OrthoFinder output from all 47 species | |
| Aob_g06472 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.07 | OrthoFinder output from all 47 species | |
| Aop_g09964 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.17 | OrthoFinder output from all 47 species | |
| Azfi_s0011.g012492 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g19514 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.10G037400.1 | HCF136, Ceric.10G037400 | protein involved in PS-II assembly *(HCF136) & original... | 0.21 | OrthoFinder output from all 47 species | |
| Cre06.g273700 | HCF136 | Photosynthesis.photophosphorylation.photosystem... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g14607 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.13 | OrthoFinder output from all 47 species | |
| Dcu_g01147 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.11 | OrthoFinder output from all 47 species | |
| Dde_g00586 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.09 | OrthoFinder output from all 47 species | |
| Ehy_g20509 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.1 | OrthoFinder output from all 47 species | |
| GSVIVT01012045001 | HCF136 | Photosynthesis.photophosphorylation.photosystem... | 0.18 | OrthoFinder output from all 47 species | |
| Gb_03750 | HCF136 | HCF136 protein involved in PS-II assembly | 0.06 | OrthoFinder output from all 47 species | |
| Len_g11400 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.18 | OrthoFinder output from all 47 species | |
| Lfl_g02953 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.12 | OrthoFinder output from all 47 species | |
| MA_10433328g0010 | HCF136 | HCF136 protein involved in PS-II assembly | 0.12 | OrthoFinder output from all 47 species | |
| Msp_g03512 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.14 | OrthoFinder output from all 47 species | |
| Nbi_g14696 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.1 | OrthoFinder output from all 47 species | |
| Ore_g40589 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.11 | OrthoFinder output from all 47 species | |
| Pir_g10204 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.08 | OrthoFinder output from all 47 species | |
| Pnu_g05859 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.08 | OrthoFinder output from all 47 species | |
| Ppi_g00841 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.14 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0024.g009047 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.13 | OrthoFinder output from all 47 species | |
| Sam_g07654 | No alias | protein involved in PS-II assembly *(HCF136) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Smo227615 | HCF136 | Photosynthesis.photophosphorylation.photosystem... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc02g014150.4.1 | HCF136, Solyc02g014150 | HCF136 protein involved in PS-II assembly | 0.18 | OrthoFinder output from all 47 species | |
| Spa_g12995 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.19 | OrthoFinder output from all 47 species | |
| Tin_g11749 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.1 | OrthoFinder output from all 47 species | |
| Zm00001e030125_P002 | HCF136, Zm00001e030125 | HCF136 protein involved in PS-II assembly | 0.14 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004751 | ribose-5-phosphate isomerase activity | IEP | HCCA |
| MF | GO:0005509 | calcium ion binding | IEP | HCCA |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009052 | pentose-phosphate shunt, non-oxidative branch | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| MF | GO:0016853 | isomerase activity | IEP | HCCA |
| MF | GO:0016854 | racemase and epimerase activity | IEP | HCCA |
| MF | GO:0016857 | racemase and epimerase activity, acting on carbohydrates and derivatives | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | HCCA |
| MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
| CC | GO:0019898 | extrinsic component of membrane | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR028203 | PSII_CF48-like_dom | 113 | 434 |
| No external refs found! |