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  5. Mp4g21750.1

Mp4g21750.1 (GAMMA-H2AX, H2AXB,...)


Aliases : GAMMA-H2AX, H2AXB, HTA3, G-H2AX

Description : histone (H2A)


Gene families : OG0000117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g21750.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g005118 GAMMA-H2AX,... histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g28967 HTA6 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g18806 HTA6 histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28150 GAMMA-H2AX,... histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene61578.t1 GAMMA-H2AX,... histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0154.g053563 RAT5, HTA1, ATHTA1 histone *(H2A) & original description: CDS=1-702 0.02 OrthoFinder output from all 47 species
Dcu_g12386 HTA6 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g20425 RAT5, HTA1, ATHTA1 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g28664 HTA6 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os05g38640.1 HTA12, LOC_Os05g38640 histone (H2A) 0.03 OrthoFinder output from all 47 species
Len_g26088 HTA6 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g15977 HTA6 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g21938 HTA6 histone *(H2A) & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g18514 GAMMA-H2AX,... histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19378 HTA10 histone *(H2A) & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g38988 RAT5, HTA1, ATHTA1 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g55354 GAMMA-H2AX,... histone *(H2A) & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g25727 HTA6 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07811 No alias histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e011643_P001 HTA6, Zm00001e011643 histone (H2A) 0.02 OrthoFinder output from all 47 species
Zm00001e020483_P001 HTA6, Zm00001e020483 histone (H2A) 0.02 OrthoFinder output from all 47 species
Zm00001e033014_P001 HTA6, Zm00001e033014 histone (H2A) 0.02 OrthoFinder output from all 47 species
Zm00001e039735_P001 GAMMA-H2AX,... histone (H2A) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032454 Histone_H2A_C 94 128
IPR007125 Histone_H2A/H2B/H3 13 91
No external refs found!