LOC_Os04g42290 (Os04g0501200)


Aliases : Os04g0501200

Description : 28.2 DNA.repair DNA glycosylase superfamily protein


Gene families : OG_01_0002648 (Gene family) Phylogenetic Tree(s): OG0002648_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os04g42290
Cluster HCCA cluster: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01023602001 No alias 28.2 DNA.repair DNA glycosylase superfamily protein 0.08 Gene family
Solyc03g116880.3.1 Solyc03g116880.3 28.2 DNA.repair DNA glycosylase superfamily protein 0.04 Gene family
Solyc12g010050.2.1 Solyc12g010050.2 28.2 DNA.repair DNA glycosylase superfamily protein 0.03 Gene family
Zm00001d003124 GRMZM2G097573 28.2 DNA.repair DNA glycosylase superfamily protein 0.04 Gene family
Zm00001d025786 GRMZM2G175269 28.2 DNA.repair DNA glycosylase superfamily protein 0.05 Gene family
Zm00001d036719 GRMZM2G171317 28.2 DNA.repair DNA glycosylase superfamily protein 0.06 Gene family

Type GO Term Name Evidence Source
BP GO:0006284 base-excision repair IEA InterProScan
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005019 Adenine_glyco 157 331
No external refs found!