LOC_Os04g42270 (Os04g0501000)


Aliases : Os04g0501000

Description : 29.2.1.2.2.523 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L23A 60S ribosomal protein L23A (RPL23aB). Paralog of RPL23aA. ribosomal protein L23AB (RPL23AB)


Gene families : OG_01_0001231 (Gene family) Phylogenetic Tree(s): OG0001231_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os04g42270
Cluster HCCA cluster: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
AT2G39460 RPL23A, RPL23AA, ATRPL23A ribosomal protein L23AA 0.21 Gene family
AT3G55280 RPL23AB ribosomal protein L23AB 0.17 Gene family
Cpa|evm.model.tig00000037.39 No alias 29.2.1.2.2.523 protein.synthesis.ribosomal... 0.19 Gene family
Cre06.g282500 No alias 29.2.1.2.2.523 protein.synthesis.ribosomal... 0.18 Gene family
GSVIVT01025606001 No alias 29.2.1.2.2.523 protein.synthesis.ribosomal... 0.11 Gene family
MA_10430928g0010 No alias 29.2.1.2.2.523 protein.synthesis.ribosomal... 0.11 Gene family
MA_10436962g0020 No alias 29.2.1.2.2.523 protein.synthesis.ribosomal... 0.12 Gene family
Smo271663 PACid_15402421 No description available 0.11 Gene family
Solyc09g005720.3.1 Solyc09g005720.3 29.2.1.2.2.523 protein.synthesis.ribosomal... 0.18 Gene family
Solyc10g084615.1.1 Solyc10g084615.1 29.2.1.2.2.523 protein.synthesis.ribosomal... 0.02 Gene family
Solyc10g086330.2.1 Solyc10g086330.2 29.2.1.2.2.523 protein.synthesis.ribosomal... 0.09 Gene family
Zm00001d003127 GRMZM2G083253 29.2.1.2.2.523 protein.synthesis.ribosomal... 0.16 Gene family
Zm00001d024655 GRMZM2G172153,... 29.2.1.2.2.523 protein.synthesis.ribosomal... 0.02 Gene family
Zm00001d025784 GRMZM2G124411 29.2.1.2.2.523 protein.synthesis.ribosomal... 0.13 Gene family

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan
CC GO:0005840 ribosome IEA InterProScan
BP GO:0006412 translation IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005633 Ribosomal_L23/L25_N 13 62
IPR013025 Ribosomal_L25/23 72 133
No external refs found!