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  5. Mp4g16700.1

Mp4g16700.1


Description : Patellin-6 OS=Arabidopsis thaliana (sp|q9scu1|patl6_arath : 333.0)


Gene families : OG0000756 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000756_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g16700.1
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AT1G22530 PATL2 PATELLIN 2 0.05 OrthoFinder output from all 47 species
AT1G72160 No alias Sec14p-like phosphatidylinositol transfer family protein 0.03 OrthoFinder output from all 47 species
Adi_g039396 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g38820 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g12882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39197 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22366 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g26093 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0004.g008775 No alias not classified & original description: CDS=313-1998 0.01 OrthoFinder output from all 47 species
Ceric.03G077900.1 Ceric.03G077900 not classified & original description: pacid=50572716... 0.02 OrthoFinder output from all 47 species
Dcu_g01677 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g09471 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g40895 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01028342001 No alias Patellin-4 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01036782001 No alias Patellin-4 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Gb_20479 No alias Patellin-6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g65380.1 LOC_Os01g65380 Patellin-5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os05g27820.1 LOC_Os05g27820 Patellin-6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os05g35460.1 LOC_Os05g35460 Patellin-5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os06g45990.2 LOC_Os06g45990 Patellin-4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g26914 PATL2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_1115516g0010 No alias Patellin-3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_9244g0010 No alias Patellin-5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Pnu_g13387 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g26428 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g064940.3.1 Solyc06g064940 Patellin-5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc09g025230.4.1 Solyc09g025230 Patellin-5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e019109_P003 Zm00001e019109 Patellin-5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e026912_P001 Zm00001e026912 Patellin-6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e031729_P005 Zm00001e031729 Patellin-5 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR001251 CRAL-TRIO_dom 454 614
IPR011074 CRAL/TRIO_N_dom 376 430
No external refs found!