LOC_Os04g42020 (Os04g0497700)


Aliases : Os04g0497700

Description : 27.3.7 RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family Positive regulator of photomorphogenesis that acts downstream of COP1 but can promote lateral root development independently of COP1 and also function as a daylength-sensitive regulator of shoot branching. CONSTANS-like 3 (COL3)


Gene families : OG_01_0000267 (Gene family) Phylogenetic Tree(s): OG0000267_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os04g42020
Cluster HCCA cluster: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
AT5G24930 ATCOL4, COL4 CONSTANS-like 4 0.05 Gene family
Cre12.g534100 No alias No description available 0.01 Gene family
GSVIVT01029107001 No alias 27.3.7 RNA.regulation of transcription.C2C2(Zn) CO-like,... 0.03 Gene family
GSVIVT01036499001 No alias No description available 0.04 Gene family
MA_7292g0010 No alias 27.3.7 RNA.regulation of transcription.C2C2(Zn) CO-like,... 0.03 Gene family
Solyc02g089540.3.1 Solyc02g089540.3 33.99 development.unspecified Homologous to the... 0.03 Gene family
Solyc07g006630.3.1 Solyc07g006630.3 27.3.7 RNA.regulation of transcription.C2C2(Zn) CO-like,... 0.02 Gene family
Zm00001d000176 GRMZM2G004483 No description available 0.04 Gene family
Zm00001d003162 GRMZM2G095598 27.3.7 RNA.regulation of transcription.C2C2(Zn) CO-like,... 0.1 Gene family
Zm00001d015468 GRMZM2G148772 27.3.7 RNA.regulation of transcription.C2C2(Zn) CO-like,... 0.03 Gene family
Zm00001d025770 No alias 27.3.7 RNA.regulation of transcription.C2C2(Zn) CO-like,... 0.09 Gene family
Zm00001d029885 GRMZM2G154580 No description available 0.06 Gene family
Zm00001d046925 GRMZM2G038783 27.3.7 RNA.regulation of transcription.C2C2(Zn) CO-like,... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR010402 CCT_domain 239 281
IPR000315 Znf_B-box 59 104
IPR000315 Znf_B-box 20 57
No external refs found!