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  5. Mp4g12300.1

Mp4g12300.1 (TRP2, TSB1, ATTSB1, TRPB)


Aliases : TRP2, TSB1, ATTSB1, TRPB

Description : subunit beta of tryptophan synthase complex


Gene families : OG0002978 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002978_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g12300.1
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AT5G28237 No alias Pyridoxal-5'-phosphate-dependent enzyme family protein 0.02 OrthoFinder output from all 47 species
Aop_g69298 TSB2 EC_4.2 carbon-oxygen lyase & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01012644001 No alias Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen... 0.03 OrthoFinder output from all 47 species
LOC_Os08g04180.1 TSB2, LOC_Os08g04180 subunit beta of tryptophan synthase complex 0.02 OrthoFinder output from all 47 species
Sam_g18408 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.01 OrthoFinder output from all 47 species
Solyc10g018380.3.1 Solyc10g018380 Tryptophan synthase beta chain 2, chloroplastic... 0.04 OrthoFinder output from all 47 species
Solyc10g018390.3.1 Solyc10g018390 Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR001926 TrpB-like_PALP 140 467
No external refs found!