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  5. Mp4g11530.1

Mp4g11530.1


Description : component DSP3 of DSP snRNA processing complex. SIEL plasmodesmata intercellular trafficking regulator protein


Gene families : OG0007306 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007306_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g11530.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g055972 No alias regulatory protein *(SIEL) of plasmodesmata... 0.03 OrthoFinder output from all 47 species
Ceric.13G038600.1 Ceric.13G038600 regulatory protein *(SIEL) of plasmodesmata... 0.05 OrthoFinder output from all 47 species
Dcu_g19028 No alias regulatory protein *(SIEL) of plasmodesmata... 0.03 OrthoFinder output from all 47 species
GSVIVT01030267001 No alias Protein translocation.plasmodesmata intercellular... 0.06 OrthoFinder output from all 47 species
Gb_33906 No alias Protein SIEL OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g08918 No alias regulatory protein *(SIEL) of plasmodesmata... 0.01 OrthoFinder output from all 47 species
Pnu_g02824 No alias regulatory protein *(SIEL) of plasmodesmata... 0.02 OrthoFinder output from all 47 species
Solyc01g090260.5.1.1 Solyc01g090260 component DSP3 of DSP snRNA processing complex. SIEL... 0.03 OrthoFinder output from all 47 species
Spa_g53551 No alias regulatory protein *(SIEL) of plasmodesmata... 0.02 OrthoFinder output from all 47 species
Zm00001e001268_P005 Zm00001e001268 component DSP3 of DSP snRNA processing complex. SIEL... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR000357 HEAT 550 575
No external refs found!