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  5. Mp4g09070.1

Mp4g09070.1


Description : component eIF3d of eIF3 mRNA-to-PIC binding complex


Gene families : OG0003519 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003519_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g09070.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00206060 evm_27.TU.AmTr_v1... Protein biosynthesis.translation... 0.03 OrthoFinder output from all 47 species
AT4G20980 No alias Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 0.02 OrthoFinder output from all 47 species
AT5G44320 No alias Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 0.07 OrthoFinder output from all 47 species
Als_g09977 No alias component *(eIF3d) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Als_g12234 No alias component *(eIF3d) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Aop_g02560 No alias component *(eIF3d) of eIF3 mRNA-to-PIC binding complex &... 0.06 OrthoFinder output from all 47 species
Azfi_s0065.g035945 No alias component *(eIF3d) of eIF3 mRNA-to-PIC binding complex &... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000142.3 No alias Protein biosynthesis.translation... 0.05 OrthoFinder output from all 47 species
Cre05.g242300 No alias Protein biosynthesis.translation... 0.07 OrthoFinder output from all 47 species
Dac_g13013 No alias component *(eIF3d) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
GSVIVT01002790001 No alias Protein biosynthesis.translation... 0.06 OrthoFinder output from all 47 species
LOC_Os05g49150.1 LOC_Os05g49150 component eIF3d of eIF3 mRNA-to-PIC binding complex 0.03 OrthoFinder output from all 47 species
MA_63764g0010 No alias component eIF3d of eIF3 mRNA-to-PIC binding complex 0.06 OrthoFinder output from all 47 species
Msp_g00632 No alias component *(eIF3d) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Nbi_g06687 No alias component *(eIF3d) of eIF3 mRNA-to-PIC binding complex &... 0.07 OrthoFinder output from all 47 species
Pir_g09601 No alias component *(eIF3d) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Ppi_g33746 No alias component *(eIF3d) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Sam_g17060 No alias component *(eIF3d) of eIF3 mRNA-to-PIC binding complex &... 0.1 OrthoFinder output from all 47 species
Smo152189 No alias Protein biosynthesis.translation... 0.01 OrthoFinder output from all 47 species
Solyc02g078120.2.1 Solyc02g078120 component eIF3d of eIF3 mRNA-to-PIC binding complex 0.06 OrthoFinder output from all 47 species
Spa_g09748 No alias component *(eIF3d) of eIF3 mRNA-to-PIC binding complex &... 0.12 OrthoFinder output from all 47 species
Tin_g02041 No alias component *(eIF3d) of eIF3 mRNA-to-PIC binding complex &... 0.08 OrthoFinder output from all 47 species
Zm00001e020233_P001 Zm00001e020233 component eIF3d of eIF3 mRNA-to-PIC binding complex 0.02 OrthoFinder output from all 47 species
Zm00001e032448_P001 Zm00001e032448 component eIF3d of eIF3 mRNA-to-PIC binding complex 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
CC GO:0005740 mitochondrial envelope IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
CC GO:0031967 organelle envelope IEP HCCA
CC GO:0031975 envelope IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR007783 eIF3d 8 518
No external refs found!