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  5. Mp4g07250.1

Mp4g07250.1


Description : component FBX of SCF E3 ubiquitin ligase complex


Gene families : OG0000644 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000644_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g07250.1

Target Alias Description ECC score Gene Family Method Actions
AT1G22220 No alias F-box family protein 0.02 OrthoFinder output from all 47 species
AT4G18380 No alias F-box family protein 0.02 OrthoFinder output from all 47 species
Adi_g060761 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Adi_g075004 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Als_g05695 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.01 OrthoFinder output from all 47 species
Aop_g01226 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.01 OrthoFinder output from all 47 species
Azfi_s0267.g061043 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ceric.14G036400.1 Ceric.14G036400 substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Dcu_g13923 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Dde_g24390 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ehy_g04831 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ehy_g04988 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ehy_g09750 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
GSVIVT01009011001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Lfl_g01772 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
MA_31373g0010 No alias component FBX of SCF E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species
MA_40961g0010 No alias component FBX of SCF E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species
Ore_g30922 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ore_g43491 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Pir_g19771 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Ppi_g12156 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ppi_g17172 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ppi_g41362 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ppi_g56972 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005863 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Sam_g50226 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.01 OrthoFinder output from all 47 species
Spa_g29905 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Tin_g05534 No alias substrate adaptor *(AUF) of SCF E3 ubiquiTin ligase... 0.02 OrthoFinder output from all 47 species
Zm00001e019495_P001 Zm00001e019495 component FBX of SCF E3 ubiquitin ligase complex 0.01 OrthoFinder output from all 47 species
Zm00001e031989_P001 Zm00001e031989 component FBX of SCF E3 ubiquitin ligase complex 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0030259 lipid glycosylation IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 31 65
No external refs found!