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  5. Mp4g06020.1

Mp4g06020.1 (RBCS1A)


Aliases : RBCS1A

Description : small subunit of ribulose-1,5-bisphosphat carboxylase/oxygenase heterodimer


Gene families : OG0000735 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000735_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g06020.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00061090 evm_27.TU.AmTr_v1... Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
AT1G67090 RBCS1A ribulose bisphosphate carboxylase small chain 1A 0.05 OrthoFinder output from all 47 species
AT5G38410 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.04 OrthoFinder output from all 47 species
AT5G38420 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.04 OrthoFinder output from all 47 species
Ala_g09842 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
Aob_g24117 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Aob_g41554 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.04 OrthoFinder output from all 47 species
Ceric.09G050600.1 RBCS1A, Ceric.09G050600 small subunit of ribulose-1,5-bisphosphat... 0.05 OrthoFinder output from all 47 species
Ceric.09G050700.1 RBCS1A, Ceric.09G050700 small subunit of ribulose-1,5-bisphosphat... 0.06 OrthoFinder output from all 47 species
Ceric.09G050800.1 RBCS1A, Ceric.09G050800 small subunit of ribulose-1,5-bisphosphat... 0.05 OrthoFinder output from all 47 species
Ceric.09G051400.1 RBCS1A, Ceric.09G051400 small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Ceric.09G051600.1 RBCS1A, Ceric.09G051600 small subunit of ribulose-1,5-bisphosphat... 0.04 OrthoFinder output from all 47 species
Ceric.09G051700.1 RBCS1A, Ceric.09G051700 small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Ceric.09G051800.1 RBCS1A, Ceric.09G051800 small subunit of ribulose-1,5-bisphosphat... 0.04 OrthoFinder output from all 47 species
Ceric.09G051900.1 RBCS1A, Ceric.09G051900 small subunit of ribulose-1,5-bisphosphat... 0.05 OrthoFinder output from all 47 species
Ceric.25G070600.1 RBCS1A, Ceric.25G070600 small subunit of ribulose-1,5-bisphosphat... 0.04 OrthoFinder output from all 47 species
Cre02.g120150 RBCS1A Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.05 OrthoFinder output from all 47 species
Dac_g44002 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
Dcu_g20638 No alias small subunit of ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
Dde_g36766 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.04 OrthoFinder output from all 47 species
Dde_g46369 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
Ehy_g04204 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.05 OrthoFinder output from all 47 species
LOC_Os12g17600.1 RBCS1A, LOC_Os12g17600 small subunit of ribulose-1,5-bisphosphat... 0.05 OrthoFinder output from all 47 species
LOC_Os12g19381.1 RBCS1A, LOC_Os12g19381 small subunit of ribulose-1,5-bisphosphat... 0.06 OrthoFinder output from all 47 species
LOC_Os12g19470.2 RBCS1A, LOC_Os12g19470 small subunit of ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
Lfl_g18439 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
MA_47626g0010 No alias small subunit of ribulose-1,5-bisphosphat... 0.05 OrthoFinder output from all 47 species
Pir_g54622 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.05 OrthoFinder output from all 47 species
Pp3c19_1840V3.1 RBCS1A, Pp3c19_1840 Ribulose bisphosphate carboxylase (small chain) family protein 0.02 OrthoFinder output from all 47 species
Pp3c2_4100V3.1 RBCS1A, Pp3c2_4100 ribulose bisphosphate carboxylase small chain 1A 0.02 OrthoFinder output from all 47 species
Pp3c3_20140V3.1 RBCS1A, Pp3c3_20140 ribulose bisphosphate carboxylase small chain 1A 0.02 OrthoFinder output from all 47 species
Ppi_g31548 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
Ppi_g32726 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.07 OrthoFinder output from all 47 species
Sam_g23016 No alias small subunit of ribulose-1,5-bisphosphat... 0.05 OrthoFinder output from all 47 species
Sam_g36381 No alias small subunit of ribulose-1,5-bisphosphat... 0.04 OrthoFinder output from all 47 species
Smo147927 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
Solyc02g063150.3.1 Solyc02g063150 small subunit of ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
Solyc02g085950.4.1 Solyc02g085950 small subunit of ribulose-1,5-bisphosphat... 0.04 OrthoFinder output from all 47 species
Solyc03g034220.3.1 Solyc03g034220 small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Spa_g19552 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR000894 RuBisCO_ssu_dom 143 251
No external refs found!