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  5. Mp4g05980.1

Mp4g05980.1 (RBCS1A)


Aliases : RBCS1A

Description : small subunit of ribulose-1,5-bisphosphat carboxylase/oxygenase heterodimer


Gene families : OG0000735 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000735_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g05980.1
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00061090 evm_27.TU.AmTr_v1... Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
Azfi_s0149.g053208 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.04 OrthoFinder output from all 47 species
Ceric.09G050800.1 RBCS1A, Ceric.09G050800 small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Ceric.25G070600.1 RBCS1A, Ceric.25G070600 small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Dac_g44002 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.04 OrthoFinder output from all 47 species
Ehy_g04204 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
Ehy_g11463 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
LOC_Os02g05830.1 RBCS1A, LOC_Os02g05830 small subunit of ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
Pp3c19_1840V3.1 RBCS1A, Pp3c19_1840 Ribulose bisphosphate carboxylase (small chain) family protein 0.02 OrthoFinder output from all 47 species
Pp3c2_4100V3.1 RBCS1A, Pp3c2_4100 ribulose bisphosphate carboxylase small chain 1A 0.02 OrthoFinder output from all 47 species
Ppi_g32726 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0124.g021603 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016151 nickel cation binding IEP HCCA
InterPro domains Description Start Stop
IPR000894 RuBisCO_ssu_dom 71 179
No external refs found!