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  5. Mp4g05400.1

Mp4g05400.1


Description : no hits & (original description: none)


Gene families : OG0006384 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006384_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g05400.1
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AT2G41960 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
AT3G58050 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 OrthoFinder output from all 47 species
Aev_g49494 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06059 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g57075 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene72823.t2 Aspi01Gene72823 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0034.g025344 No alias not classified & original description: CDS=353-3817 0.02 OrthoFinder output from all 47 species
Ceric.26G064500.1 Ceric.26G064500 not classified & original description: pacid=50599638... 0.03 OrthoFinder output from all 47 species
Cre02.g087200 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g37316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os10g01610.1 LOC_Os10g01610 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g25893 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g02496 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10462 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07178 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006366 transcription by RNA polymerase II IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!