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  5. Mp4g02980.1

Mp4g02980.1 (NFB01, NFB1, MUB3.9, FAS2)


Aliases : NFB01, NFB1, MUB3.9, FAS2

Description : component CAF1b/FAS2 of CAF1 histone chaperone complex


Gene families : OG0006619 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006619_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g02980.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AT5G64630 NFB01, NFB1, MUB3.9, FAS2 Transducin/WD40 repeat-like superfamily protein 0.03 OrthoFinder output from all 47 species
Aop_g38719 NFB01, NFB1, MUB3.9, FAS2 component *(CAF1b/FAS2) of CAF1 histone chaperone... 0.05 OrthoFinder output from all 47 species
Aspi01Gene25457.t2 NFB01, NFB1,... component *(CAF1b/FAS2) of CAF1 histone chaperone... 0.02 OrthoFinder output from all 47 species
Ceric.12G028700.1 NFB01, NFB1,... component *(CAF1b/FAS2) of CAF1 histone chaperone... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020629.12 NFB01, NFB1, MUB3.9, FAS2 Chromatin assembly factor 1 subunit FAS2 homolog... 0.06 OrthoFinder output from all 47 species
Dac_g43644 NFB01, NFB1, MUB3.9, FAS2 component *(CAF1b/FAS2) of CAF1 histone chaperone... 0.07 OrthoFinder output from all 47 species
GSVIVT01026512001 NFB01, NFB1, MUB3.9, FAS2 Chromatin organisation.histone chaperone activities.CAF1... 0.07 OrthoFinder output from all 47 species
Gb_06025 NFB01, NFB1, MUB3.9, FAS2 component CAF1b/FAS2 of CAF1 histone chaperone complex 0.1 OrthoFinder output from all 47 species
LOC_Os08g01680.1 NFB01, NFB1,... component CAF1b/FAS2 of CAF1 histone chaperone complex 0.09 OrthoFinder output from all 47 species
Len_g36215 NFB01, NFB1, MUB3.9, FAS2 component *(CAF1b/FAS2) of CAF1 histone chaperone... 0.1 OrthoFinder output from all 47 species
MA_6422g0020 NFB01, NFB1, MUB3.9, FAS2 component CAF1b/FAS2 of CAF1 histone chaperone complex 0.19 OrthoFinder output from all 47 species
Nbi_g23632 NFB01, NFB1, MUB3.9, FAS2 component *(CAF1b/FAS2) of CAF1 histone chaperone... 0.06 OrthoFinder output from all 47 species
Spa_g51583 NFB01, NFB1, MUB3.9, FAS2 component *(CAF1b/FAS2) of CAF1 histone chaperone... 0.12 OrthoFinder output from all 47 species
Zm00001e029144_P001 NFB01, NFB1,... component CAF1b/FAS2 of CAF1 histone chaperone complex 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000725 recombinational repair IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR024977 Apc4_WD40_dom 71 164
IPR001680 WD40_repeat 369 394
IPR001680 WD40_repeat 10 41
No external refs found!