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  5. Mp4g02060.1

Mp4g02060.1 (PRHA)


Aliases : PRHA

Description : transcription factor (PHD)


Gene families : OG0002217 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002217_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g02060.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272780 HAT3.1,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
AT3G19510 HAT3.1 Homeodomain-like protein with RING/FYVE/PHD-type zinc... 0.03 OrthoFinder output from all 47 species
AT4G29940 PRHA pathogenesis related homeodomain protein A 0.03 OrthoFinder output from all 47 species
Adi_g089261 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g115505 PRHA PHD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03830 PRHA PHD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09843 PRHA PHD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cre12.g492200 HAT3.1 RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
GSVIVT01037894001 HAT3.1 RNA biosynthesis.transcriptional activation.HB... 0.05 OrthoFinder output from all 47 species
Gb_17969 PRHA transcription factor (PHD) 0.01 OrthoFinder output from all 47 species
LOC_Os02g05450.1 PRHA, LOC_Os02g05450 transcription factor (PHD) 0.04 OrthoFinder output from all 47 species
LOC_Os06g12400.1 HAT3.1, LOC_Os06g12400 transcription factor (PHD) 0.06 OrthoFinder output from all 47 species
MA_10427612g0010 HAT3.1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ppi_g22208 PRHA PHD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e019808_P001 HAT3.1, Zm00001e019808 transcription factor (PHD) 0.08 OrthoFinder output from all 47 species
Zm00001e027428_P001 HAT3.1, Zm00001e027428 transcription factor (PHD) 0.02 OrthoFinder output from all 47 species
Zm00001e029056_P003 HAT3.1, Zm00001e029056 transcription factor (PHD) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 639 687
IPR019787 Znf_PHD-finger 320 374
No external refs found!