Mp4g01320.1 (SRG3)

Aliases : SRG3

Description : Glycerophosphodiester phosphodiesterase GDPD1, chloroplastic OS=Arabidopsis thaliana (sp|q9sga2|gdpd1_arath : 291.0)

Gene families : OG0002257 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002257_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Mp4g01320.1
Cluster	HCCA: Cluster_39

Target	Alias	Description	ECC score	Gene Family Method
AT3G02040	SRG3	senescence-related gene 3	0.02	OrthoFinder output from all 47 species
Aev_g19472	SRG3	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g28231	SRG3	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.33G032000.1	Ceric.33G032000	not classified & original description: pacid=50607734...	0.03	OrthoFinder output from all 47 species
Ceric.33G032100.1	Ceric.33G032100	not classified & original description: pacid=50607333...	0.03	OrthoFinder output from all 47 species
Len_g11904	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
MA_10359231g0020	No alias	Glycerophosphodiester phosphodiesterase GDPD2...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006629	lipid metabolic process	IEA	Interproscan
MF	GO:0008081	phosphoric diester hydrolase activity	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0042578	phosphoric ester hydrolase activity	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004096	catalase activity	IEP	HCCA
MF	GO:0004555	alpha,alpha-trehalase activity	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0005984	disaccharide metabolic process	IEP	HCCA
BP	GO:0005991	trehalose metabolic process	IEP	HCCA
BP	GO:0009311	oligosaccharide metabolic process	IEP	HCCA
MF	GO:0015927	trehalase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR030395	GP_PDE_dom	140	415

External Links

No external refs found!