1. Home
  2. Species
  3. Marchantia polymorpha
  4. Sequence
  5. Mp4g00020.1

Mp4g00020.1


Description : component mtRPL4 of large ribosomal subunit proteome


Gene families : OG0005986 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005986_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g00020.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00151570 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
Adi_g020397 No alias component *(uL4m) of large mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Als_g32195 No alias component *(uL4m) of large mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ceric.24G005200.1 Ceric.24G005200 component *(uL4m) of large mitoribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Cre12.g520400 No alias No description available 0.03 OrthoFinder output from all 47 species
Dcu_g44796 No alias component *(uL4m) of large mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Gb_04540 No alias component mtRPL4 of large ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
LOC_Os11g37510.1 LOC_Os11g37510 component mtRPL4 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Lfl_g01309 No alias component *(uL4m) of large mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
MA_10437219g0010 No alias component mtRPL4 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Nbi_g01874 No alias component *(uL4m) of large mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006510 No alias component *(uL4m) of large mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Sam_g24925 No alias component *(uL4m) of large mitoribosomal-subunit... 0.01 OrthoFinder output from all 47 species
Smo227946 No alias Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Solyc12g088730.2.1 Solyc12g088730 component mtRPL4 of large ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
Tin_g02447 No alias component *(uL4m) of large mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Zm00001e006048_P001 Zm00001e006048 component mtRPL4 of large ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR002136 Ribosomal_L4/L1e 201 386
No external refs found!