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  5. Mp3g23390.1

Mp3g23390.1


Description : component MPE1 of Cleavage and Polyadenylation Specificity Factor (CPSF) complex


Gene families : OG0001168 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001168_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp3g23390.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g013405 No alias component *(MPE1) of Cleavage and Polyadenylation... 0.03 OrthoFinder output from all 47 species
Adi_g102684 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene16755.t1 Aspi01Gene16755 component *(MPE1) of Cleavage and Polyadenylation... 0.02 OrthoFinder output from all 47 species
Aspi01Gene24993.t2 Aspi01Gene24993 component *(MPE1) of Cleavage and Polyadenylation... 0.02 OrthoFinder output from all 47 species
Cre12.g543303 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g12334 No alias component *(MPE1) of Cleavage and Polyadenylation... 0.04 OrthoFinder output from all 47 species
Dde_g03466 No alias component *(MPE1) of Cleavage and Polyadenylation... 0.02 OrthoFinder output from all 47 species
LOC_Os10g29560.1 LOC_Os10g29560 component MPE1 of Cleavage and Polyadenylation... 0.02 OrthoFinder output from all 47 species
Ore_g41923 No alias component *(MPE1) of Cleavage and Polyadenylation... 0.03 OrthoFinder output from all 47 species
Pir_g05416 No alias component *(MPE1) of Cleavage and Polyadenylation... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008408 No alias not classified & original description: CDS=1-186 0.03 OrthoFinder output from all 47 species
Solyc08g061890.4.1 Solyc08g061890 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g12461 No alias component *(MPE1) of Cleavage and Polyadenylation... 0.04 OrthoFinder output from all 47 species
Zm00001e005216_P001 Zm00001e005216 E3 ubiquitin ligase PQT3-like OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e012354_P001 Zm00001e012354 E3 ubiquitin ligase PQT3-like OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004652 polynucleotide adenylyltransferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR025829 Zn_knuckle_CX2CX3GHX4C 203 223
IPR014891 DWNN_domain 3 76
No external refs found!