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  5. Mp3g22970.1

Mp3g22970.1


Description : Regulator of nonsense transcripts 1 homolog OS=Arabidopsis thaliana (sp|q9fjr0|rent1_arath : 214.0)


Gene families : OG0006888 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006888_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp3g22970.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00245550 evm_27.TU.AmTr_v1... Regulator of nonsense transcripts 1 homolog... 0.04 OrthoFinder output from all 47 species
AT5G35970 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 OrthoFinder output from all 47 species
Aev_g05515 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g09081 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g19085 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0225.g058913 No alias not classified & original description: CDS=1-1656 0.03 OrthoFinder output from all 47 species
Cba_g06579 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.19G036700.1 Ceric.19G036700 not classified & original description: pacid=50576348... 0.02 OrthoFinder output from all 47 species
Dac_g15964 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g01970 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01024253001 No alias Regulator of nonsense transcripts 1 homolog... 0.04 OrthoFinder output from all 47 species
Gb_07655 No alias Regulator of nonsense transcripts 1 homolog... 0.05 OrthoFinder output from all 47 species
LOC_Os02g47560.1 LOC_Os02g47560 Regulator of nonsense transcripts 1 homolog... 0.03 OrthoFinder output from all 47 species
LOC_Os09g04440.1 LOC_Os09g04440 Regulator of nonsense transcripts 1 homolog... 0.03 OrthoFinder output from all 47 species
Lfl_g36332 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10434072g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10435849g0020 No alias Regulator of nonsense transcripts 1 homolog... 0.04 OrthoFinder output from all 47 species
Nbi_g08978 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g16466 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36707 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo90782 No alias Regulator of nonsense transcripts 1 homolog... 0.04 OrthoFinder output from all 47 species
Solyc03g097370.4.1 Solyc03g097370 Regulator of nonsense transcripts 1 homolog... 0.03 OrthoFinder output from all 47 species
Tin_g09516 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
InterPro domains Description Start Stop
IPR041677 DNA2/NAM7_AAA_11 551 767
IPR041679 DNA2/NAM7-like_C 776 980
No external refs found!