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  5. Mp3g22930.1

Mp3g22930.1


Description : F-box protein PP2-A15 OS=Arabidopsis thaliana (sp|q9lf92|p2a15_arath : 95.1)


Gene families : OG0000279 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000279_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp3g22930.1
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
AT5G24560 AtPP2-B12, PP2-B12 phloem protein 2-B12 0.03 OrthoFinder output from all 47 species
Aob_g24092 MEE66 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0322.g064522 No alias not classified & original description: CDS=100-843 0.02 OrthoFinder output from all 47 species
Azfi_s0322.g064523 No alias not classified & original description: CDS=241-444 0.02 OrthoFinder output from all 47 species
Ceric.16G068500.1 AtPP2-B1,... not classified & original description: pacid=50588978... 0.02 OrthoFinder output from all 47 species
Ceric.16G068900.1 AtPP2-B1,... not classified & original description: pacid=50589027... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001042.17 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g08840 AtPP2-B8, PP2-B8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21011 ATPP2-B11, PP2-B11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_39361 PP2-A15, AtPP2-A15 component FBX of SCF E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species
LOC_Os02g56800.1 AtPP2-B2,... Putative F-box protein PP2-B2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os12g03740.1 AtPP2-B10,... F-box protein PP2-B10 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g41000 AtPP2-A13, PP2-A13 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_7604366g0010 AtPP2-B6, PP2-B6 F-box protein PP2-B11 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp3g03850.1 AtPP2-B1, PP2-B1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp4g13890.1 No alias Putative F-box protein PP2-B12 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Ore_g10204 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g29123 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c18_370V3.1 Pp3c18_370 No annotation 0.01 OrthoFinder output from all 47 species
Ppi_g08930 AtPP2-B8, PP2-B8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g051160.2.1 MEE66, Solyc10g051160 Putative F-box protein PP2-B12 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e023222_P001 AtPP2-A13,... component FBX of SCF E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR025886 PP2-like 185 343
IPR004146 DC1 376 418
No external refs found!