Mp3g22050.1

Description : histone H3 variant (CENH3)

Gene families : OG0000128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Mp3g22050.1

Target	Alias	Description	ECC score	Gene Family Method
Aob_g26768	No alias	histone *(H3) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene55695.t1	Aspi01Gene55695	histone *(H3) & original description: none	0.02	OrthoFinder output from all 47 species
Gb_19430	No alias	histone (H3)	0.03	OrthoFinder output from all 47 species
LOC_Os02g25940.1	LOC_Os02g25940	histone (H3)	0.02	OrthoFinder output from all 47 species
LOC_Os04g34240.1	LOC_Os04g34240	histone (H3)	0.05	OrthoFinder output from all 47 species
LOC_Os06g06460.1	LOC_Os06g06460	histone (H3)	0.02	OrthoFinder output from all 47 species
LOC_Os11g05730.1	LOC_Os11g05730	histone (H3)	0.04	OrthoFinder output from all 47 species
Nbi_g07789	No alias	histone *(H3) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g62462	No alias	histone *(H3) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0032993	protein-DNA complex	None	Extended
CC	GO:0044815	DNA packaging complex	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008107	galactoside 2-alpha-L-fucosyltransferase activity	IEP	HCCA
MF	GO:0008417	fucosyltransferase activity	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA
MF	GO:0031127	alpha-(1,2)-fucosyltransferase activity	IEP	HCCA
BP	GO:0042546	cell wall biogenesis	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007125	Histone_H2A/H2B/H3	3	129

External Links

No external refs found!